Template-based Modeling Results for YMIA_ECOLI

Submitted Primary Sequence

>Length 42
MPSGNQEPRRDPELKRKAWLAVFLGSALFWVVVALLIWKVWG
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--------10--------20--------30--------40

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MPSGNQEPRRDPELKRKAWLAVFLGSALFWVVVALLIWKVWG
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
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--------10--------20--------30--------40

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MPSGNQEPRRDPELKRKAWLAVFLGSALFWVVVALLIWKVWG
453233334422301220000000000000000000002113
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--------10--------20--------30--------40

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MPSGNQEPRRDPELKRKAWLAVFLGSALFWVVVALLIWKVWG
1	MUSTER	2vq2A2	0.314	0.833	1.184	threading_1	-----QFPPAFKELARTKMLAGQLGDADYYFKKYQSRVEV--
2	SPARKS	1ehkb2	0.132	0.905	1.222	threading_2	---DEHKAHKAILAYEKGWLAFSLAMLFVFIALIAYTLATH-
3	PPA-I	1spfA	0.257	0.833	1.190	threading_3	----LRIPCCPVNLKRLLVVVVVVVLVVVVIVGALLMGL---
4	MUSTER	1lghB	0.200	0.952	1.148	threading_4	SLSGLTE--EEAIAVHDQFKTTFSAFIILAAVAHVLVWVWWF
5	SPARKS	1m56d1	0.250	0.857	1.217	threading_5	MDITQQEKTFAGFVRMVTWAAVVIVAALIFLALANA------
6	PPA-I	2jwaA	0.200	0.952	1.179	threading_6	--GCPAEQRASPLTSIISAVVGILLVVVLGVVFGILIKRRQQ
7	MUSTER	1spfA	0.312	0.762	1.145	threading_7	IPC----PV---NLKRLLVVVVVVVLVVVVIVGALLMGL---
8	SPARKS	1m56d	0.250	0.857	1.217	threading_8	MDITQQEKTFAGFVRMVTWAAVVIVAALIFLALANA------
9	PPA-I	1lghB	0.122	0.976	1.084	threading_9	-RSLSGLTEEEAIAVHDQFKTTFSAFIILAAVAHVLVWVWKP
10	MUSTER	2jwaA	0.231	0.929	1.134	threading_10	CPA---EQRASPLTSIISAVVGILLVVVLGVVFGILIKRRQQ

Predicted Tertiary Structure


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TM-score=0.690 to 1ouvA SCOP code=a.118.18.1	TM-score=0.618 to 2r2vA SCOP code=h.1.3.1	TM-score=0.667 to 1kv4A SCOP code=j.4.1.3	TM-score=0.575 to 1spfA SCOP code=j.35.1.1	TM-score=0.578 to 2jr8A SCOP code=j.4.1.3