Template-based Modeling Results for YKGN_ECOLI

Submitted Primary Sequence

>Length 112
MSGKRYPEEFKTEAVKQVVDLGYSVASVATRLDITTHSLYAWIKKYGPDSSTNKEQSDAQAEIRRLQKELKRVTDERDILKKAAVDSICQCNTPFNYLFRCFELQCLSRSVV
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSGKRYPEEFKTEAVKQVVDLGYSVASVATRLDITTHSLYAWIKKYGPDSSTNKEQSDAQAEIRRLQKELKRVTDERDILKKAAVDSICQCNTPFNYLFRCFELQCLSRSVV
CCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSGKRYPEEFKTEAVKQVVDLGYSVASVATRLDITTHSLYAWIKKYGPDSSTNKEQSDAQAEIRRLQKELKRVTDERDILKKAAVDSICQCNTPFNYLFRCFELQCLSRSVV
5534411331122003202242220220023030112001100341233222344323212112301421330221230011000100020211010001001110123224
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSGKRYPEEFKTEAVKQVVDLGYSVASVATRLDITTHSLYAWIKKYGPDSSTNKEQSDAQAEIRRLQKELKRVTDERDILKKAAVDSICQCNTPFNYLFRCFELQCLSRSVV
1	MUSTER	2jn6A	0.318	0.759	1.521	threading_1	MPTKTYSEEFKRDAVALYENSGASLQQIANDLGINRVTLKNWIIKYGSNHNVQGTTPSEAEQIRQLKKENALQRART--------------RHP-------------AESCL
2	SPARKS	2jn6a	0.290	0.830	1.392	threading_2	MPTKTYSEEFKRDAVALYENSGASLQQIANDLGINRVTLKNWIIKYGSNHGTTPSAAVSEAEQIRQLKKENALQRAR---TRHPAESCLEHHHHHH----------------
3	PROSPECT2	2jn6A	0.260	0.857	1.177	threading_3	MPTKTYSEEFKRDAVALYENSGASLQQIANDLGINRVTLKNWIIKYGSNHNVQGTTPSAA----VSEAEQIRQLKKENALQRARTRHPAE------------SCLEHHHHHH
4	PPA-I	2jn6A	0.272	0.821	2.021	threading_4	MPTKTYSEEFKRDAVALYENSGASLQQIANDLGINRVTLKNWIIKYGSNHNVQGTTPSEAEQIRQLKKENALQRARTRHPAESCLEHHHHHH--------------------
5	HHPRED-l	2rn7_A	0.175	0.866	3.837	threading_5	MTKTRFSPEVRQRAVRMVLEQWATICSIAPKIGCTPETLRVWVRQHERDTGGDGLTTAERQRLKEPERENRELRRSNDILRLASAYFAAEFDRLWKK---------------
6	HHPRED-g	2rn7_A	0.175	0.866	3.275	threading_6	MTKTRFSPEVRQRAVRMVLEQWATICSIAPKIGCTPETLRVWVRQHERDTGGDGLTTAERQRLKEPERENRELRRSNDILRLASAYFAKEFDRLWKK---------------
7	SP3	2rn7a	0.175	0.866	1.483	threading_7	MTKTRFSPEVRQRAVRMVLEQWATICSIAPKIGCTPETLRVWVRQHERDTGGDDGTTAERQRLKEPERENRELRRSNDILRLASAYFAKEFDRLWKK---------------
8	SAM-T99	2jn6A	0.351	0.661	2.461	threading_8	MPTKTYSEEFKRDAVALYENDGASLQQIANDLGINRVTLKNWIIKYGSNGTTPSAAVSEAEQIRQLKKENALQR--------------------------------------
9	MUSTER	1hlvA	0.159	0.955	1.106	threading_9	MKRRQLTFREKSRIIQEVEEPDLRKGEIARRFNIPPSTLSTILKNKRATCRKTNKLSPYDKLEGLLIAWFQQIRAAGIILKEKALRIAEELGMD----FT-ASNGWLDRFRR
10	SPARKS	2rn7a	0.175	0.866	1.287	threading_10	MTKTRFSPEVRQRAVRMVLEQWATICSIAPKIGCTPETLRVWVRQHERDTGGDDGTTAERQRLKEPERENRELRRSNDILRLASAYFAKEFDRLWKK---------------

Predicted Tertiary Structure


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TM-score=0.715 to 2jn6A SCOP code=a.4.1.19	TM-score=0.799 to 2jn6A SCOP code=a.4.1.19	TM-score=0.798 to 2jn6A SCOP code=a.4.1.19	TM-score=0.802 to 2jn6A SCOP code=a.4.1.19	TM-score=0.796 to 2jn6A SCOP code=a.4.1.19