Template-based Modeling Results for YKGI_ECOLI

Submitted Primary Sequence

>Length 78
MFKKSVLFATLLSGVMAFSTNADDKIILKHISVSSVSASPTVLEDTIADIARKYNASSWKVTSMRIDNNSTATAVLYK
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--------10--------20--------30--------40--------50--------60--------70

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MFKKSVLFATLLSGVMAFSTNADDKIILKHISVSSVSASPTVLEDTIADIARKYNASSWKVTSMRIDNNSTATAVLYK
CCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEEEEECCCCEEEEEEEC
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--------10--------20--------30--------40--------50--------60--------70

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MFKKSVLFATLLSGVMAFSTNADDKIILKHISVSSVSASPTVLEDTIADIARKYNASSWKVTSMRIDNNSTATAVLYK
542211110100000000233233311021000100231222012000200452511101000010123110101113
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--------10--------20--------30--------40--------50--------60--------70

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MFKKSVLFATLLSGVMAFSTNADDKIILKHISVSSVSASPTVLEDTIADIARKYNASSWKVTSMRIDNNSTATAVLYK
1	MUSTER	2jnaA	0.286	0.987	2.054	threading_1	MKK-RIIAAALLATVASFSTLAAKLVKVGTINVSQSGGSPSDLREKLSELADAKGGKYYHIIAAREHGNFEAVAEVYN
2	SPARKS	2jnaa	0.286	0.987	2.696	threading_2	MK-KRIIAAALLATVASFSTLAAEQVSVGTINVSQSGGSPSDLREKLSELADAKGGKYYHIIAAREGPNFEAVAEVYN
3	PROSPECT2	2jnaA	0.286	0.987	0.728	threading_3	M-KKRIIAAALLATVASFSTLAAEQVSVGTINVSQSGGSPSDLREKLSELADAKGGKYYHIIAAREHGPFEAVAEVYH
4	PPA-I	2jnaA	0.273	0.987	2.153	threading_4	MK-KRIIAAALLATVASFSTLAAEQVSVGTINVSQSGGSPSDLREKLSELADAKGGKYYHIIAAREHGPFEAVAEVYN
5	HHPRED-l	2jna_A	0.289	0.974	5.960	threading_5	MKKR-IIAAALLATVASFSTLAAEQVKVGTINVSQQISSPSDLREKLSELADAKGGKYYHIIAAREGPNFEAVAEVY-
6	HHPRED-g	2jna_A	0.286	0.987	4.861	threading_6	MKK-RIIAAALLATVASFSTLAAELVKVGTINVSQSISSPSDLREKLSELADAKGGKYYHIIAAREGPNFEAVAEVYN
7	SP3	2jnaa	0.286	0.987	2.599	threading_7	MK-KRIIAAALLATVASFSTLAAEQVSVGTINVSQSGGSPSDLREKLSELADAKGGKYYHIIAAREGPNFEAVAEVYN
8	SAM-T99	2jnaA	0.289	0.974	2.071	threading_8	MKKR-IIAAALLATVASFSTLAFKLVKVGTINVSQSGGSPSDLREKLSELADAKGGKYYHIIAAREHPNFEAVAEVY-
9	MUSTER	2nocA	0.197	0.974	1.920	threading_9	MKTGYKVM-LGALAFVVTNVYAAEIMKIGTISTTG-EMSPLDAREDLIKKADEKGADVVVLTSGQTENKIHGTADIYK
10	SPARKS	2noca	0.221	0.987	2.235	threading_10	MKTKVMLGALAVVTNVYAAEIMKKTDFIGTISTTG-EMSPLDAREDLIKKADEKGADVVVLTSGQTENKIHGTADIYK

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.628 to 2jnaA SCOP code=d.230.6.1	TM-score=0.621 to 2jnaA SCOP code=d.230.6.1	TM-score=0.565 to 2jnaA SCOP code=d.230.6.1	TM-score=0.578 to 2jnaA SCOP code=d.230.6.1	TM-score=0.576 to 2jnaA SCOP code=d.230.6.1