Template-based Modeling Results for YJGH_ECOLI

Submitted Primary Sequence

>Length 131
MVERTAVFPAGRHSLYAEHRYSAAIRSGDLLFVSGQVGSREDGTPEPDFQQQVRLAFDNLHATLAAAGCTFDDIIDVTSFHTDPENQFEDIMTVKNEIFSAPPYPNWTAVGVTWLAGFDFEIKVIARIPEQ
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MVERTAVFPAGRHSLYAEHRYSAAIRSGDLLFVSGQVGSREDGTPEPDFQQQVRLAFDNLHATLAAAGCTFDDIIDVTSFHTDPENQFEDIMTVKNEIFSAPPYPNWTAVGVTWLAGFDFEIKVIARIPEQ
CCCCEEECCCCCCCCCCCCCCCCEEEECCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHEEEEEEEEECHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCEEEEEEEECCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MVERTAVFPAGRHSLYAEHRYSAAIRSGDLLFVSGQVGSREDGTPEPDFQQQVRLAFDNLHATLAAAGCTFDDIIDVTSFHTDPENQFEDIMTVKNEIFSAPPYPNWTAVGVTWLAGFDFEIKVIARIPEQ
55422001121330122313101001001000000201133322133203200210030022002203020300010000000021002100200120022312000000002201302010100021356
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MVERTAVFPAGRHSLYAEHRYSAAIRSGDLLFVSGQVGSREDGTPEPDFQQQVRLAFDNLHATLAAAGCTFDDIIDVTSFHTDPENQFEDIMTVKNEIFSAPPYPNWTAVGVTWLAGFDFEIKVIARIPEQ
1	MUSTER	1pf5A	1.000	0.992	4.737	threading_1	-VERTAVFPAGRHSLYAEHRYSAAIRSGDLLFVSGQVGSREDGTPEPDFQQQVRLAFDNLHATLAAAGCTFDDIIDVTSFHTDPENQFEDIMTVKNEIFSAPPYPNWTAVGVTWLAGFDFEIKVIARIPEQ
2	SPARKS	3lmea	0.268	0.969	4.682	threading_2	-SLKIIA--PTDKTITPSGTWSIGARAGDFVFIGGMHGTDRTGKMVDGDEARIRRMFDNMLAAAEAAGATKADAVRLTVFVTDVAKYRPVVNKVQKDIWGDGPYPPRTVLQVPALDGDIAEIDGTFYAPA-
3	PROSPECT2	1pf5A	0.992	0.992	3.184	threading_3	V-ERTAVFPAGRHSLYAEHRYSAAIRSGDLLFVSGQVGSREDGTPEPDFQQQVRLAFDNLHATLAAAGCTFDDIIDVTSFHTDPENQFEDIMTVKNEIFSAPPYPNWTAVGVTWLAGFDFEIKVIARIPEQ
4	PPA-I	1pf5A	1.000	0.992	5.497	threading_4	-VERTAVFPAGRHSLYAEHRYSAAIRSGDLLFVSGQVGSREDGTPEPDFQQQVRLAFDNLHATLAAAGCTFDDIIDVTSFHTDPENQFEDIMTVKNEIFSAPPYPNWTAVGVTWLAGFDFEIKVIARIPEQ
5	HHPRED-l	1pf5_A	1.000	0.985	3.487	threading_5	-VERTAVFPAGRHSLYAEHRYSAAIRSGDLLFVSGQVGSREDGTPEPDFQQQVRLAFDNLHATLAAAGCTFDDIIDVTSFHTDPENQFEDIMTVKNEIFSAPPYPNWTAVGVTWLAGFDFEIKVIARIPE-
6	HHPRED-g	1xrg_A	0.281	0.924	2.544	threading_6	--YIEVV--KTNKAPEAIGPYSQAIVTGSFVYTSGQIPINPQTVVDGGIEEQAKQVLENLKNVLEAAGSSLNKVVKTTVFIKD--DSFAKVNEVYAKYFS-EPYPARSCVEVSKLPGVLIEIEAVAIK---
7	SP3	3lmea	0.262	0.962	4.627	threading_7	L--KIIAP--TDKTITPSGTWSIGARAGDFVFIGGMHGTDRVTKMVDGDEARIRRMFDNMLAAAEAAGATKADAVRLTVFVTDVAKYRPVVNKVQKDIWGDGPYPPRTVLQVPALDGDIAEIDGTFYAPA-
8	SAM-T99	2dyyD	0.295	0.931	3.420	threading_8	----MKEVIFTENAPKPIGPYSQAIKAGNFLFIAGQIPIDPTGEVKGDIKDQTRQVLENIKAILEAAGYSLNDVIKVTVYLKDMNDF-AKMNEVYAEYF-GESKPARVAVEVSRLPDVLIEIEAIAYK---
9	MUSTER	3lmeA	0.270	0.962	4.087	threading_9	L--KIIA--PTDKTITPSGTWSIGARAGDFVFIGGMHGTDRVGKMVDGDEARIRRMFDNMLAAAEAAGATKADAVRLTVFVTDVAKYRPVVNKVQKDIWGDGPYPPRTVLQVPALDGDIAEIDGTFYAPA-
10	SPARKS	1pf5a	1.000	0.992	4.582	threading_10	-VERTAVFPAGRHSLYAEHRYSAAIRSGDLLFVSGQVGSREDGTPEPDFQQQVRLAFDNLHATLAAAGCTFDDIIDVTSFHTDPENQFEDIMTVKNEIFSAPPYPNWTAVGVTWLAGFDFEIKVIARIPEQ

Predicted Tertiary Structure


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TM-score=0.993 to 1pf5A TM-score=0.997 to native SCOP code=d.79.1.1	TM-score=0.993 to 1pf5A TM-score=0.997 to native SCOP code=d.79.1.1	TM-score=0.891 to 1qd9A TM-score=0.884 to native SCOP code=d.79.1.1	TM-score=0.990 to 1pf5A TM-score=0.994 to native SCOP code=d.79.1.1	TM-score=0.993 to 1pf5A TM-score=0.997 to native SCOP code=d.79.1.1

Experimental Structure

Download 1pf5A

SCOP code=d.79.1.1