Template-based Modeling Results for YIAG_ECOLI

Submitted Primary Sequence

>Length 96
MEYKDPMHELLSSLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQANPALSKQLME
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--------10--------20--------30--------40--------50--------60--------70--------80--------90

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MEYKDPMHELLSSLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQANPALSKQLME
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCHHHHHHHHC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MEYKDPMHELLSSLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQANPALSKQLME
553322121002001201233332322122321212202201411213131003101021100331325323222100200200221121033125
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--------10--------20--------30--------40--------50--------60--------70--------80--------90

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MEYKDPMHELLSSLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQANPALSKQLME
1	MUSTER	3gn5A	0.170	0.917	1.581	threading_1	IMNKEESDAFMAQVKAFRASVNA-------ETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPELLNEIR-
2	SPARKS	3o9xa	0.178	0.938	2.459	threading_2	ESIMN--KEESDAFMAQVKAFRASVNA---ETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPELLNEIR-
3	PROSPECT2	3o9xA	0.159	0.917	1.274	threading_3	IMNKEESDAFMAQVKAFRASVNAET-------VAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPELLNEI-R
4	PPA-I	2ppxA	0.164	0.635	2.796	threading_4	-----------------------------------PRIKIIRRALKLTQEEFSARYHIPLGTLRDWEQGRSEPDQPARAYLKIIAVDPEGTAAALR
5	HHPRED-l	2ppx_A	0.167	0.625	2.156	threading_5	-----------------------------------PRIKIIRRALKLTQEEFSARYHIPLGTLRDWEQGRSEPDQPARAYLKIIAVDPEGTAAAL-
6	HHPRED-g	2ppx_A	0.164	0.635	2.216	threading_6	-----------------------------------PRIKIIRRALKLTQEEFSARYHIPLGTLRDWEQGRSEPDQPARAYLKIIAVDPEGTAAALR
7	SP3	2ppxa	0.164	0.635	2.509	threading_7	-----------------------------------PRIKIIRRALKLTQEEFSARYHIPLGTLRDWEQGRSEPDQPARAYLKIIAVDPEGTAAALR
8	SAM-T99	2ppxA	0.164	0.635	2.633	threading_8	-----------------------------------PRIKIIRRALKLTQEEFSARYHIPLGTLRDWEQGRSEPDQPARAYLKIIAVDPEGTAAALR
9	MUSTER	2ppxA	0.164	0.635	1.405	threading_9	-----------------------------------PRIKIIRRALKLTQEEFSARYHIPLGTLRDWEQGRSEPDQPARAYLKIIAVDPEGTAAALR
10	SPARKS	2ppxa	0.164	0.635	2.386	threading_10	-----------------------------------PRIKIIRRALKLTQEEFSARYHIPLGTLRDWEQGRSEPDQPARAYLKIIAVDPEGTAAALR

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.594 to 1s4kA SCOP code=a.35.1.6	TM-score=0.806 to 2ppxA SCOP code=a.35.1.3	TM-score=0.604 to 1s4kA SCOP code=a.35.1.6	TM-score=0.581 to 1s4kA SCOP code=a.35.1.6	TM-score=0.806 to 2ppxA SCOP code=a.35.1.3