Template-based Modeling Results for YHFA_ECOLI

Submitted Primary Sequence

>Length 134
MQARVKWVEGLTFLGESASGHQILMDGNSGDKAPSPMEMVLMAAGGCSAIDVVSILQKGRQDVVDCEVKLTSERREEAPRLFTHINLHFIVTGRDLKDAAVARAVDLSAEKYCSVALMLEKAVNITHSYEVVAA
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MQARVKWVEGLTFLGESASGHQILMDGNSGDKAPSPMEMVLMAAGGCSAIDVVSILQKGRQDVVDCEVKLTSERREEAPRLFTHINLHFIVTGRDLKDAAVARAVDLSAEKYCSVALMLEKAVNITHSYEVVAA
CEEEEEEECCEEEEEEECCCCEEEECCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEEEEEEEEEECCCCCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHCCCHHHHHCCCCCEEEEEEEEEEC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MQARVKWVEGLTFLGESASGHQILMDGNSGDKAPSPMEMVLMAAGGCSAIDVVSILQKGRQDVVDCEVKLTSERREEAPRLFTHINLHFIVTGRDLKDAAVARAVDLSAEKYCSVALMLEKAVNITHSYEVVAA
21020211340101020232110001132233210010000000000000001100331433021020202012334224102100010002044133200120021003310100320342020211010035
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MQARVKWVEGLTFLGESASGHQILMDGNSGDKAPSPMEMVLMAAGGCSAIDVVSILQKGRQDVVDCEVKLTSERREEAPRLFTHINLHFIVTGRDLKDAAVARAVDLSAEKYCSVALMLEKAVNITHSYEVVAA
1	MUSTER	1ml8A	1.000	0.978	4.229	threading_1	MQARVKWVEGLTFLGESASGHQILMDGNSGDKAPSPMEMVLMAAGGCSAIDVVSILQKGRQDVVDCEVKLTSERRE---RLFTHINLHFIVTGRDLKDAAVARAVDLSAEKYCSVALMLEKAVNITHSYEVVAA
2	SPARKS	1ml8a	1.000	0.978	4.192	threading_2	MQARVKWVEGLTFLGESASGHQILMDGNSGDKAPSPMEMVLMAAGGCSAIDVVSILQKGRQDVVDCEVKLTSERRE---RLFTHINLHFIVTGRDLKDAAVARAVDLSAEKYCSVALMLEKAVNITHSYEVVAA
3	PROSPECT2	1ml8a	0.985	0.978	2.689	threading_3	MQARVKWVEGLTFLGESASGHQILMDGNSGDKAPSPMEMVLMAAGGCSAIDVVSILQKGRQDVVDCEVKLTSER---RERLFTHINLHFIVTGRDLKDAAVARAVDLSAEKYCSVALMLEKAVNITHSYEVVAA
4	PPA-I	1ml8A	0.985	0.978	6.281	threading_4	MQARVKWVEGLTFLGESASGHQILMDGNSGDKAPSPMEMVLMAAGGCSAIDVVSILQKGRQDVVDCEVKLTSER---RERLFTHINLHFIVTGRDLKDAAVARAVDLSAEKYCSVALMLEKAVNITHSYEVVAA
5	HHPRED-l	1ml8_A	1.000	0.970	4.474	threading_5	MQARVKWVEGLTFLGESASGHQILMDGNSGDKAPSPMEMVLMAAGGCSAIDVVSILQKGRQDVVDCEVKLTSERRE---RLFTHINLHFIVTGRDLKDAAVARAVDLSAEKYCSVALMLEKAVNITHSYEVVA-
6	HHPRED-g	1ml8_A	1.000	0.978	4.291	threading_6	MQARVKWVEGLTFLGESASGHQILMDGNSGDKAPSPMEMVLMAAGGCSAIDVVSILQKGRQDVVDCEVKLTSERRE---RLFTHINLHFIVTGRDLKDAAVARAVDLSAEKYCSVALMLEKAVNITHSYEVVAA
7	SP3	1ml8a	1.000	0.978	4.412	threading_7	MQARVKWVEGLTFLGESASGHQILMDGNSGDKAPSPMEMVLMAAGGCSAIDVVSILQKGRQDVVDCEVKLTSERRE---RLFTHINLHFIVTGRDLKDAAVARAVDLSAEKYCSVALMLEKAVNITHSYEVVAA
8	SAM-T99	1ml8A	1.000	0.978	4.606	threading_8	MQARVKWVEGLTFLGESASGHQILMDGNSGDKAPSPMEMVLMAAGGCSAIDVVSILQKGRQDVVDCEVKLTSERRE---RLFTHINLHFIVTGRDLKDAAVARAVDLSAEKYCSVALMLEKAVNITHSYEVVAA
9	MUSTER	2e8fA	0.344	0.955	3.663	threading_9	KEVELELSSEATFLSKTSIGEITAG-----EKGLNPMELLLVSIGSCSGVDVYHILKKKRQEVKDIKIFLKGKRREKHPKIYEEIEIKYVAVG-KVEEKALEQAVKLSTEKYCSVLAMVKPSTNLKISWEVKWE
10	SPARKS	2e8ca	0.352	0.955	3.922	threading_10	KEVELELSSEATFLSKTSIG-----EITAGEKGLNPMELLLVSIGSCSGVDVYHILKKKRQEVKDIKIFLKGKRREKHPKIYEEIEIKYVAVG-KVEEKALEQAVKLSTEKYCSVLAMVKPSTNLKISWEVKWE

Predicted Tertiary Structure


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TM-score=0.984 to 1ml8A TM-score=0.995 to native SCOP code=d.227.1.2	TM-score=0.981 to 1ml8A TM-score=0.992 to native SCOP code=d.227.1.2	TM-score=0.984 to 1ml8A TM-score=0.995 to native SCOP code=d.227.1.2	TM-score=0.978 to 1ml8A TM-score=0.989 to native SCOP code=d.227.1.2	TM-score=0.978 to 1ml8A TM-score=0.989 to native SCOP code=d.227.1.2

Experimental Structure

Download 1ml8A

SCOP code=d.227.1.2