Template-based Modeling Results for YHAI_ECOLI

Submitted Primary Sequence

>Length 118
MQWYLSVLKNYVGFSGRARRKEYWMFTLINAIVGAIINVIQLILGLELPYLSMLYLLATFLPVLALAIRRLHDTDRSGAWALLFFVPFIGWLVLLVFFCTEGTSGSNRYGNDPKFGSN
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MQWYLSVLKNYVGFSGRARRKEYWMFTLINAIVGAIINVIQLILGLELPYLSMLYLLATFLPVLALAIRRLHDTDRSGAWALLFFVPFIGWLVLLVFFCTEGTSGSNRYGNDPKFGSN
CCHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MQWYLSVLKNYVGFSGRARRKEYWMFTLINAIVGAIINVIQLILGLELPYLSMLYLLATFLPVLALAIRRLHDTDRSGAWALLFFVPFIGWLVLLVFFCTEGTSGSNRYGNDPKFGSN
3310120022001120100110000000000000000100120011212100000000000000010021023133100000000000000000001001312222132131142235
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MQWYLSVLKNYVGFSGRARRKEYWMFTLINAIVGAIINVIQLILGLELPYLSMLYLLATFLPVLALAIRRLHDTDRSGAWALLFFVPFIGWLVLLVFFCTEGTSGSNRYGNDPKFGSN
1	SPARKS	1psra	0.132	0.771	1.191	threading_1	IIGMIDMFHKYTRRDDKIDKPSLLTMMKENF-----PNFLSACDKKGTNYLADVFEKK--------------DKNEDK---KIDFSEFLSLLGDIATDYHKQSHGAA-----PCSGGS
2	PPA-I	2vl0A2	0.090	0.847	1.284	threading_2	------------------NPSYYLWSFILPLGLIIAASWSVFWLESFSERLQTSFTLMLTVVAYAFYTSNIPYTTVIDQMIIAGYGSIFAAILLIIFAHHRQANGVEDDLLIQRCRLA
3	PPA-I	2kubA	0.136	0.686	1.226	threading_3	---------------------ENLDKMISEAEVLNDMAARKLITLDAEQQLELMKSLVATQSQLEATKNLIGDPNATVADLQIAYTTLGNNTQALGNELIKL----------------
4	PPA-I	2axtZ	0.129	0.525	1.226	threading_4	--------------------------------MTILFQLALAALVILSFVMVIGVPVAYASPQDWDRSKQLIFLGSGLWIALVLVVGVLNFFVV------------------------
5	PPA-I	2ii2A4	0.135	0.627	1.123	threading_5	----------------------------CNISARVNVIKKAMKNVNDFRAIHDVVLIATPDERLKLAQAYKEKTGNDLLQDFVDQIPLTSAASYLCHLAIRE----------------
6	PPA-I	2x2vA	0.129	0.525	1.062	threading_6	-------------------------------------AFLGAAIAAGLAAVAGAIAVAIIVKATIEGTTRQPELRGTIGVPLAEAVPIIAIVISLLILF-------------------
7	MUSTER	2ahzA	0.188	0.856	0.917	threading_7	MLSFLLTLKRMLRACLRAWKDKEFQVLFVLTILTLISGTIFYSTVEGLRPIDALYFSVVTLTTVGD------NFSPQTDFGKIFTILYIFIGIGLVFGFI------HKLAVNP-----
8	SPARKS	1yoza	0.180	0.847	0.978	threading_8	INSFLDRMGEII--RGEKSVEEADKLLDQKNIFEMFRSDCEEILNEKEEVQRNFYLLKTYVVSLSIHFERLKEFAESKGEKKLD--PEVINEIALYIDRVEKEV--------------
9	PROSPECT2	3cljA	0.172	0.983	0.884	threading_9	MDFTLESFKDLKSGISGSRIKKLTTYALESKIISLIIDYSRL--CPDSHKLGSLYIIDSIGRAYLDETRSNSNKPGTCAHAINTLGEVIQELLSDAIAKSNQKSYLNAIRSKCFAAAL
10	PPA-I	2l35A	0.111	0.534	1.035	threading_10	-----------------------------------------CSTVSPGVLAGIVVGDLVLTVLIALAVYFLGRLGTAEVLGIISIVLVATVLKTIVLIPFLEQN--------------

Predicted Tertiary Structure


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TM-score=0.316 to 2tmaA SCOP code=h.1.5.1	TM-score=0.778 to 1psrA SCOP code=a.39.1.2	TM-score=0.597 to 1i6zA SCOP code=a.7.7.1	TM-score=0.621 to 1dowA SCOP code=a.24.9.1	TM-score=0.734 to 2axtZ SCOP code=f.17.5.1