Template-based Modeling Results for YGFY_ECOLI

Submitted Primary Sequence

>Length 88
MDINNKARIHWACRRGMRELDISIMPFFEHEYDSLSDDEKRIFIRLLECDDPDLFNWLMNHGKPADAELEMMVRLIQTRNRERGPVAI
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--------10--------20--------30--------40--------50--------60--------70--------80

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MDINNKARIHWACRRGMRELDISIMPFFEHEYDSLSDDEKRIFIRLLECDDPDLFNWLMNHGKPADAELEMMVRLIQTRNRERGPVAI
CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MDINNKARIHWACRRGMRELDISIMPFFEHEYDSLSDDEKRIFIRLLECDDPDLFNWLMNHGKPADAELEMMVRLIQTRNRERGPVAI
4533111211100221030001000100221032023311310220030311200200142231232302200210122234323224
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--------10--------20--------30--------40--------50--------60--------70--------80

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MDINNKARIHWACRRGMRELDISIMPFFEHEYDSLSDDEKRIFIRLLECDDPDLFNWLMNHGKPADAELEMMVRLIQTRNRERGPVAI
1	MUSTER	1x6iA	1.000	1.000	3.812	threading_1	MDINNKARIHWACRRGMRELDISIMPFFEHEYDSLSDDEKRIFIRLLECDDPDLFNWLMNHGKPADAELEMMVRLIQTRNRERGPVAI
2	SPARKS	1x6ia	1.000	1.000	3.449	threading_2	MDINNKARIHWACRRGMRELDISIMPFFEHEYDSLSDDEKRIFIRLLECDDPDLFNWLMNHGKPADAELEMMVRLIQTRNRERGPVAI
3	PROSPECT2	1x6iA	1.000	1.000	1.804	threading_3	MDINNKARIHWACRRGMRELDISIMPFFEHEYDSLSDDEKRIFIRLLECDDPDLFNWLMNHGKPADAELEMMVRLIQTRNRERGPVAI
4	PPA-I	1x6iA	1.000	1.000	6.867	threading_4	MDINNKARIHWACRRGMRELDISIMPFFEHEYDSLSDDEKRIFIRLLECDDPDLFNWLMNHGKPADAELEMMVRLIQTRNRERGPVAI
5	HHPRED-l	1x6i_A	1.000	0.989	6.075	threading_5	MDINNKARIHWACRRGMRELDISIMPFFEHEYDSLSDDEKRIFIRLLECDDPDLFNWLMNHGKPADAELEMMVRLIQTRNRERGPVA-
6	HHPRED-g	1x6i_A	1.000	1.000	4.585	threading_6	MDINNKARIHWACRRGMRELDISIMPFFEHEYDSLSDDEKRIFIRLLECDDPDLFNWLMNHGKPADAELEMMVRLIQTRNRERGPVAI
7	SP3	1x6ia	1.000	1.000	3.707	threading_7	MDINNKARIHWACRRGMRELDISIMPFFEHEYDSLSDDEKRIFIRLLECDDPDLFNWLMNHGKPADAELEMMVRLIQTRNRERGPVAI
8	SAM-T99	1x6iA	1.000	1.000	4.701	threading_8	MDINNKARIHWACRRGMRELDISIMPFFEHEYDSLSDDEKRIFIRLLECDDPDLFNWLMNHGKPADAELEMMVRLIQTRNRERGPVAI
9	MUSTER	2jr5A	0.489	1.000	3.199	threading_9	YTAEQKARIKWACRRGMLELDVVIMPFFEECFDSLTESEQDDFVALLESDDPDLFAWVMGHGRCENLGLAAMVDKIVAHNLSKVRLEH
10	SPARKS	1puza	0.316	0.898	3.154	threading_10	FDDIAKRKIRFQTRRGLLELDLIFGRFMEKEFEHLSDKELSEFSEILEFQDQELLALINGHSETDKGHLIPMLEKIRRA---------

Predicted Tertiary Structure


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TM-score=0.681 to 1puzA TM-score=0.985 to native SCOP code=a.218.1.1	TM-score=0.441 to 2h85A TM-score=0.318 to native SCOP code=c.66.1.48	TM-score=0.681 to 1puzA TM-score=0.985 to native SCOP code=a.218.1.1	TM-score=0.681 to 1puzA TM-score=0.985 to native SCOP code=a.218.1.1	TM-score=0.681 to 1puzA TM-score=0.985 to native SCOP code=a.218.1.1

Experimental Structure

Download 1x6iA

SCOP code=a.218.1.1