Template-based Modeling Results for YGAV_ECOLI

Submitted Primary Sequence

>Length 99
MTELAQLQASAEQAAALLKAMSHPKRLLILCMLSGSPGTSAGELTRITGLSASATSQHLARMRDEGLIDSQRDAQRILYSIKNEAVNAIIATLKNVYCP
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--------10--------20--------30--------40--------50--------60--------70--------80--------90

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MTELAQLQASAEQAAALLKAMSHPKRLLILCMLSGSPGTSAGELTRITGLSASATSQHLARMRDEGLIDSQRDAQRILYSIKNEAVNAIIATLKNVYCP
CCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEECCEEEEEECCHHHHHHHHHHHHHCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MTELAQLQASAEQAAALLKAMSHPKRLLILCMLSGSPGTSAGELTRITGLSASATSQHLARMRDEGLIDSQRDAQRILYSIKNEAVNAIIATLKNVYCP
552122122102200200200111200000010123220000101420312110012001203421002022312100000223002100200242104
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--------10--------20--------30--------40--------50--------60--------70--------80--------90

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MTELAQLQASAEQAAALLKAMSHPKRLLILCMLSGSPGTSAGELTRITGLSASATSQHLARMRDEGLIDSQRDAQRILYSIKNEAVNAIIATLKNVYCP
1	MUSTER	3cuoA	1.000	0.990	3.610	threading_1	MTELAQLQASAEQAAALLKAMSHPKRLLILCMLSGSPGTSAGELTRITGLSASATSQHLARMRDEGLIDSQRDAQRILYSIKNEAVNAIIATLKNVYC-
2	SPARKS	3pqja	0.278	0.980	3.419	threading_2	-MTREDMEKRANEVANLLKTLSHPVRLMLVCTLVEGE-FSVGELEQQIGIGQPTLSQQLGVLRESGIVETRRNIKQIFYRLTEAKAAQLVNALYTIFCA
3	PROSPECT2	3cuoA	1.000	0.990	2.108	threading_3	MTELAQLQASAEQAAALLKAMSHPKRLLILCMLSGSPGTSAGELTRITGLSASATSQHLARMRDEGLIDSQRDAQRILYSIKNEAVNAIIATLKNVYC-
4	PPA-I	3cuoA	1.000	0.990	4.746	threading_4	MTELAQLQASAEQAAALLKAMSHPKRLLILCMLSGSPGTSAGELTRITGLSASATSQHLARMRDEGLIDSQRDAQRILYSIKNEAVNAIIATLKNVYC-
5	HHPRED-l	1r1u_A	0.233	0.909	2.294	threading_5	-------NDTLERVTEIFKALGDYNRIRIMELLSVSE-ASVGHISHQLNLSQSNVSHQLKLLKSVHLVKAKRQGQSMIYSLDDIHVATMLKQIHHANH-
6	HHPRED-g	1r1u_A	0.239	0.929	2.334	threading_6	------NTDTLERVTEIFKALGDYNRIRIMELLSVSE-ASVGHISHQLNLSQSNVSHQLKLLKSVHLVKAKRQGQSMIYSLDDIHVATMLKAIHHANHP
7	SP3	3pqja	0.278	0.980	3.587	threading_7	-MTREDMEKRANEVANLLKTLSHPVRLMLVCTLVEGE-FSVGELEQQIGIGQPTLSQQLGVLRESGIVETRRNIKQIFYRLTEAKAAQLVNALYTIFCA
8	SAM-T99	3pqjA	0.281	0.970	3.608	threading_8	-MTREDMEKRANEVANLLKTLSHPVRLMLVCTLV-EGEFSVGELEQQIGIGQPTLSQQLGVLRESGIVETRRNIKQIFYRLTEAKAAQLVNALYTIFC-
9	MUSTER	3pqjA	0.299	0.980	3.381	threading_9	MT-REDMEKRANEVANLLKTLSHPVRLMLVCTLVEG-EFSVGELEQQIGIGQPTLSQQLGVLRESGIVETRRNIKQIFYRLTEAKAAQLVNALYTIFCA
10	SPARKS	3cuoa	1.000	0.990	3.277	threading_10	MTELAQLQASAEQAAALLKAMSHPKRLLILCMLSGSPGTSAGELTRITGLSASATSQHLARMRDEGLIDSQRDAQRILYSIKNEAVNAIIATLKNVYC-

Predicted Tertiary Structure


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TM-score=0.788 to 1r1uC TM-score=0.980 to native SCOP code=a.4.5.5	TM-score=0.788 to 1r1uC TM-score=0.980 to native SCOP code=a.4.5.5	TM-score=0.762 to 1r1uC TM-score=0.879 to native SCOP code=a.4.5.5	TM-score=0.788 to 1r1uC TM-score=0.980 to native SCOP code=a.4.5.5	TM-score=0.788 to 1r1uC TM-score=0.980 to native SCOP code=a.4.5.5

Experimental Structure

Download 3cuoA

SCOP code=a.4.5.5