Template-based Modeling Results for YDIE_ECOLI

Submitted Primary Sequence

>Length 63
MRYTDSRKLTPETDANHKTASPQPIRRISSQTLLGPDGKLIIDHDGQEYLLRKTQAGKLLLTK
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--------10--------20--------30--------40--------50--------60

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MRYTDSRKLTPETDANHKTASPQPIRRISSQTLLGPDGKLIIDHDGQEYLLRKTQAGKLLLTK
CCCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHCCCCCEEEEEECCEEEEEEECCCCCEEECC
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--------10--------20--------30--------40--------50--------60

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MRYTDSRKLTPETDANHKTASPQPIRRISSQTLLGPDGKLIIDHDGQEYLLRKTQAGKLLLTK
553332332223232334212322222010220033311000113010000122332111225
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--------10--------20--------30--------40--------50--------60

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MRYTDSRKLTPETDANHKTASPQPIRRISSQTLLGPDGKLIIDHDGQEYLLRKTQAGKLLLTK
1	MUSTER	2jraA	0.317	1.000	3.067	threading_1	MTASDRLGADPTQAASSARAVSIVGNQIDSRELFTVDREIVIAHGDDRYRLRLTSQNKLILTK
2	SPARKS	2jraa	0.302	1.000	2.233	threading_2	MTASDRLGADPTQAASSPGGARAVSNQIDSRELFTVDREIVIAHGDDRYRLRLTSQNKLILTK
3	PROSPECT2	2jraA	0.302	1.000	1.124	threading_3	MMTASDRLGADPTQAASSPGGARAVNQIDSRELFTVDREIVIAHGDDRYRLRLTSQNKLILTK
4	PPA-I	2jraA	0.302	1.000	3.764	threading_4	MTASDRLGADPTQAASSPGGASIVGNQIDSRELFTVDREIVIAHGDDRYRLRLTSQNKLILTK
5	HHPRED-l	2jra_A	0.290	0.984	5.155	threading_5	MTASDRLGADPTQAASSPGGARAVGNQIDSRELFTVDREIVIAHGDDRYRLRLTSQNKLILT-
6	HHPRED-g	2jra_A	0.302	1.000	4.188	threading_6	MTASDRLGADPTQAASSPGGARIVGNQIDSRELFTVDREIVIAHGDDRYRLRLTSQNKLILTK
7	SP3	2jraa	0.302	1.000	1.402	threading_7	MTASDRLGADPTQAASSPGGARAVSNQIDSRELFTVDREIVIAHGDDRYRLRLTSQNKLILTK
8	SAM-T99	2jraA	0.302	1.000	3.447	threading_8	MMTASDRLGADPTQAASSPGGARAGNQIDSRELFTVDREIVIAHGDDRYRLRLTSQNKLILTK
9	MUSTER	2dlbA	0.177	0.984	0.861	threading_9	AGYLNNIALNLEIVLKNKADSPEVSETL-CENLLLSKEVSFLKADGSVENFKLSDEYEITNTE
10	SPARKS	1pm3a	0.164	0.968	0.938	threading_10	MRIVEEMVGKEVLDSSAKVIGKVKDVEVDIES--QAIESLVLGKGGGETIVMVKKIGDKILLK

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.421 to 1qq1A SCOP code=b.80.1.6	TM-score=0.447 to 1qq1A SCOP code=b.80.1.6	TM-score=0.423 to 1qq1A SCOP code=b.80.1.6	TM-score=0.442 to 1qq1A SCOP code=b.80.1.6	TM-score=0.447 to 1qq1A SCOP code=b.80.1.6