Template-based Modeling Results for YDFX_ECOLI

Submitted Primary Sequence

>Length 96
MKITPEQAREALDAWICRPGMTQEQATILITEAFWALKERPNIDVQRVTYEGGAIDQRALGVNRVKIFERWKAIDTRDKREKFTALVPAIMEATTG
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--------10--------20--------30--------40--------50--------60--------70--------80--------90

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKITPEQAREALDAWICRPGMTQEQATILITEAFWALKERPNIDVQRVTYEGGAIDQRALGVNRVKIFERWKAIDTRDKREKFTALVPAIMEATTG
CCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKITPEQAREALDAWICRPGMTQEQATILITEAFWALKERPNIDVQRVTYEGGAIDQRALGVNRVKIFERWKAIDTRDKREKFTALVPAIMEATTG
552223202300100002122222300110020012133222030120213212112300010112002103332133112101200110132234
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--------10--------20--------30--------40--------50--------60--------70--------80--------90

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MKITPEQAREALDAWICRPGMTQEQATILITEAFWALKERPNIDVQRVTYEGGAIDQRALGVNRVKIFERWKAIDTRDKREKFTALVPAIMEATTG
1	MUSTER	3c4rC	0.341	0.854	1.537	threading_1	-KIKHEHIRA--NAWAHPDG--EKVPAAEITRAYFELGTFPELY--------DDSHPEALARNTQKIFRWVEK-DTPDAVEKIQALLPAIEKSPPL
2	SPARKS	3c4ra	0.305	0.854	1.324	threading_2	-KIKHEHIR--ANAWAHPDG--EKVPAAEITRAYFELGTFPEL------YDDSHPE---ALARNTQKIFRWVEKDTPDAVEKIQALLPAIEKSPPL
3	PPA-I	3c4rC	0.341	0.854	1.653	threading_3	-KIKHEHIRA--NAWAHPDG--EKVPAAEITRAYFELGTFPELY--------DDSHPEALARNTQKIFRWVEK-DTPDAVEKIQALLPAIEKSPPL
4	HHPRED-l	3c4r_A	0.367	0.823	7.814	threading_4	-KIKHEHIR---NAWAHPDG--EKVPAAEITRAYFELG-TF-------PELYDDSHPEALARNTQKIF-RWVEKDTPDAVEKIQALLPAIEKS-P-
5	HHPRED-g	3c4r_A	0.362	0.833	5.872	threading_5	-KIKHEHIR---NAWAHPDG--EKVPAAEITRAYFELG--TFPEL------YDDSHPEALARNTQKIF-RWVEKDTPDAVEKIQALLPAIEKS-PP
6	SP3	3c4ra	0.354	0.854	1.120	threading_6	-KIKHEHIR--ANAWAHPDG--EKVPAAEITRAYFELGTFPEL------YDDSHPE--ALARNTQKIFRWVE-KDTPDAVEKIQALLPAIEKSPPL
7	SAM-T99	3c4rC	0.346	0.844	4.869	threading_7	-KIKHEHIRA--NAWAHPD--GEKVPAAEITRAYFELG-T-------FPELYDDSHPEALARNTQKIF-RWVEKDTPDAVEKIQALLPAIEKSPP-
8	MUSTER	2pziA3	0.140	0.896	0.727	threading_8	--VTEEQIRDAARRVEALPPTEPLQIRALVLGGALDWLKDNKASTNHI---GFPFTSHGLRLGVEASLRSLARVPTQRHRYTLVDMANKV----P-
9	SPARKS	1iqpa1	0.111	0.938	0.709	threading_9	-RARPEDIREMMLLAL---KGNFLKAREKLREILLKQGLSGELVMHKENLPIEEPKKVLLADKIGEYNFRLVEG--ANEIIQLEALLAQFTLIGKK
10	PROSPECT2	3c4rA	0.366	0.854	0.969	threading_10	-KIKHEHIR--ANAWAHPDG--EKVPAAEITRAYFELGTFPEL--------YDDSHPEALARNTQKIF-RWVEKDTPDAVEKIQALLPAIEKSAGF

Predicted Tertiary Structure


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TM-score=0.495 to 2gtlF SCOP code=a.1.1.2	TM-score=0.492 to 2gtlH SCOP code=a.1.1.2	TM-score=0.528 to 1gt0C SCOP code=a.4.1.1	TM-score=0.495 to 2gtlF SCOP code=a.1.1.2	TM-score=0.514 to 1gt0C SCOP code=a.4.1.1