Template-based Modeling Results for YDFB_ECOLI

Submitted Primary Sequence

>Length 42
MDFDTIMEKAYEEYFEGLAEGEEALSFSEFKQALSSSAKSNG
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--------10--------20--------30--------40

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MDFDTIMEKAYEEYFEGLAEGEEALSFSEFKQALSSSAKSNG
CCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCC
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--------10--------20--------30--------40

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MDFDTIMEKAYEEYFEGLAEGEEALSFSEFKQALSSSAKSNG
551321022002200210130241021220121122224334
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--------10--------20--------30--------40

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MDFDTIMEKAYEEYFEGLAEGEEALSFSEFKQALSSSAKSNG
1	MUSTER	1usdA	0.216	0.881	1.134	threading_1	SDLQRVKQELMEEVKKELQKVKEEI-IEAFVQELRKRG----
2	PPA-I	1usdA	0.216	0.881	1.017	threading_2	SDLQRVKQELMEEVKKELQKVKEEI-IEAFVQELRKRG----
3	MUSTER	2ga8A2	0.167	0.857	1.134	threading_3	IDYEATEERVAKRHLQS------VTTIAEGREKFRSNDLLNG
4	MUSTER	1tdpA1	0.244	0.976	1.104	threading_4	MDSQTLYLNLSEAYKDPEVKANEFL-SKLVVQCAGKLTASNS
5	MUSTER	1jqmB5	0.219	0.762	1.085	threading_5	L-VEVAADNIMLKYLE----GEE-PTEEELVAAIRKGT----
6	MUSTER	1zxaA	0.250	0.857	1.049	threading_6	AKILMLKEERIKELEKRLSEKEEE--IQELKRKLHKCQ----
7	MUSTER	2oqqA	0.225	0.952	1.027	threading_7	SAYLSELENRVKDLENKNSELEERLSLQNENQMLRHILKN--
8	SPARKS	3qf7d	0.257	0.833	0.975	threading_8	LD----YFELFKEYLKKREENHEKL-LKILDELLDEVKKS--
9	PROSPECT2	2qeuA1	0.095	1.000	0.564	threading_9	ATSQDILKQHAAHYESDGGLPEALVQLAEYPETFDAYSRRTT
10	PPA-I	1zxaA	0.250	0.857	0.937	threading_10	AKILMLKEERIKELEKRLSEKEEE--IQELKRKLHKCQ----

Predicted Tertiary Structure


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TM-score=0.697 to 2r2vA SCOP code=h.1.3.1	TM-score=0.697 to 2r2vA SCOP code=h.1.3.1	TM-score=0.508 to 2g3qA SCOP code=a.5.2.1	TM-score=0.843 to 1tdpA SCOP code=a.29.8.1	TM-score=0.483 to 1jqmB SCOP code=i.1.1.1