Template-based Modeling Results for YDDL_ECOLI

Submitted Primary Sequence

>Length 96
MKLKIVAVVVTGLLAANVAHAAEVYNKDGNKLDLYGKVTALRYFTDDKRDDGDKTYARLGFKGETQINDQMIGFGHWEYDFKGYNDEANGSRGKNL
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--------10--------20--------30--------40--------50--------60--------70--------80--------90

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKLKIVAVVVTGLLAANVAHAAEVYNKDGNKLDLYGKVTALRYFTDDKRDDGDKTYARLGFKGETQINDQMIGFGHWEYDFKGYNDEANGSRGKNL
CCCCHHHHHHHHHHHHCHHHEEEEEECCCCEEEEEEEEEEEEEECCCCCCCCCCCEEEEEEEEEEEECCCEEEEEEEEEEEECCCCCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKLKIVAVVVTGLLAANVAHAAEVYNKDGNKLDLYGKVTALRYFTDDKRDDGDKTYARLGFKGETQINDQMIGFGHWEYDFKGYNDEANGSRGKNL
552311010000000010100010023322200010101001002334433233210100020101022201000101010213333233242444
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--------10--------20--------30--------40--------50--------60--------70--------80--------90

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MKLKIVAVVVTGLLAANVAHAAEVYNKDGNKLDLYGKVTALRYFTDDKRDDGDKTYARLGFKGETQINDQMIGFGHWEYDFKGYNDEANGSRGKNL
1	MUSTER	2ixxA	0.613	0.781	2.149	threading_1	---------------------AEVYNKDGNKLDLYGKVDGLHYFSDDKSVDGDQTYMRLGFKGETQVTDQLTGYGQWEYQIQGNAPESENNSWTRV
2	SPARKS	1hxxa	0.573	0.781	2.680	threading_2	---------------------AEIYNKDGNKVDLYGKAVGLHYFSKGNGENGDMTYARLGFKGETQINSDLTGYGQWEYNFQGNNSEGADAQKTRL
3	PROSPECT2	2kc0A1	0.140	0.969	0.644	threading_3	AG---LADALTAPLDHKDKGLQSLTLDQNEKLKLAAQGAEKTYGNGDTGKLKNDKVSRFDFIRQIEVDGQLITLESGEFQVYKQSHSQDSEHSGKM
4	PPA-I	1phoA1	0.560	0.781	4.271	threading_4	---------------------AEIYNKDGNKLDVYGKVKAMHYMSDNASKDGDQSYIRFGFKGETQINDQLTGYGRWEAEFAGNKAESDTAQQKTR
5	HHPRED-l	2j1n_A	0.608	0.771	4.355	threading_5	---------------------AEVYNKDGNKLDLYGKVDGLHYFSDNKDVDGDQTYMRLGFKGETQVTDQLTGYGQWEYQIQGNSAENENNSTRV-
6	HHPRED-g	2j1n_A	0.600	0.781	4.308	threading_6	---------------------AEVYNKDGNKLDLYGKVDGLHYFSDNKDVDGDQTYMRLGFKGETQVTDQLTGYGQWEYQIQGNSAENENNSWTRV
7	SP3	1hxxa	0.573	0.781	2.318	threading_7	---------------------AEIYNKDGNKVDLYGKAVGLHYFSKGNGENGDMTYARLGFKGETQINSDLTGYGQWEYNFQGNNSEGADAQKTRL
8	SAM-T99	1phoA1	0.603	0.708	4.220	threading_8	---------------------AEIYNKDGNKLDVYGKVKAMHYMSDNASKDGDQSYIRFGFKGETQINDQLTGYGRWEAEFAGNKAESD-------
9	MUSTER	1phoA	0.560	0.781	2.090	threading_9	---------------------AEIYNKDGNKLDVYGKVKAMHYMSDNASKDGDQSYIRFGFKGETQINDQLTGYGRWEAEFAGNKAESDAQQKTRL
10	SPARKS	1e54a	0.179	0.698	1.327	threading_10	-----------------------------SSVTLFGIVDTNVAYVNKDAATSGASTSRLGLRGTEDLGGGLKAGFWLEGEIFGDDGNASGFNFKRR

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.686 to 1phoA SCOP code=f.4.3.1	TM-score=0.720 to 1phoA SCOP code=f.4.3.1	TM-score=0.446 to 1phoA SCOP code=f.4.3.1	TM-score=0.405 to 2j44A SCOP code=b.3.1.3	TM-score=0.720 to 1phoA SCOP code=f.4.3.1