Template-based Modeling Results for YDAQ_ECOLI

Submitted Primary Sequence

>Length 71
MAQVIFNEEWMVEYGLMLRTGLGARQIEAYRQNCWVEGFHFKRVSPLGKPDSKRGIIWYNYPKINQFIKDS
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--------10--------20--------30--------40--------50--------60--------70

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MAQVIFNEEWMVEYGLMLRTGLGARQIEAYRQNCWVEGFHFKRVSPLGKPDSKRGIIWYNYPKINQFIKDS
CCEEEECHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCEEEECCCCCCCCCCCEEEEECCHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MAQVIFNEEWMVEYGLMLRTGLGARQIEAYRQNCWVEGFHFKRVSPLGKPDSKRGIIWYNYPKINQFIKDS
42110112310110001222101221021011201222010120122232323200000102301211434
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--------10--------20--------30--------40--------50--------60--------70

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MAQVIFNEEWMVEYGLMLRTGLGARQIEAYRQNCWVEGFHFKRVSPLGKPDSKRGIIWYNYPKINQFIKDS
1	MUSTER	2kvvA	0.729	0.986	3.885	threading_1	MAQIIFNEEWMVEKALMVRTGLGARQIESYRQGAWIEGVHFKRVSPSGEKT-LRGTTWYNYPEINKFIRDS
2	SPARKS	2kvva	0.729	0.986	4.245	threading_2	MAQIIFNEEWMVEKALMVRTGLGARQIESYRQGAWIEGVHFKRVSPSGEKT-LRGTTWYNYPEINKFIRDS
3	PROSPECT2	2kvvA	0.714	0.986	1.156	threading_3	MAQIIFNEEWMVEKALMVRTGLGARQIESYRQGAWIEGVHFKRVSPSGEK-TLRGTTWYNYPEINKFIRDH
4	PPA-I	2kvvA	0.729	0.986	5.545	threading_4	MAQIIFNEEWMVEKALMVRTGLGARQIESYRQGAWIEGVHFKRVSPSGEK-TLRGTTWYNYPEINKFIRDS
5	HHPRED-l	2kvv_A	0.725	0.972	8.666	threading_5	MAQIIFNEEWMVEKALMVRTGLGARQIESYRQGAWIEGVHFKRVSPSGEK-TLRGTTWYNYPEINKFIRD-
6	HHPRED-g	2kvv_A	0.729	0.986	6.698	threading_6	MAQIIFNEEWMVEKALMVRTGLGARQIESYRQGAWIEGVHFKRVSPSGEK-TLRGTTWYNYPEINKFIRDS
7	SP3	2kvva	0.729	0.986	2.334	threading_7	MAQIIFNEEWMVEKALMVRTGLGARQIESYRQGAWIEGVHFKRVSPSGEKT-LRGTTWYNYPEINKFIRDS
8	SAM-T99	2kvvA	0.700	0.986	4.946	threading_8	MAQIIFNEEWMVEKALMVRTGLGARQIESYRQGAWIEGVHFKRVSPSGEKTLRGT-TWYNYPEINKFIRDS
9	MUSTER	1z4hA	0.177	0.873	0.851	threading_9	MQHELQPDSLVDLKFIMADTGFGKTFIYDRIKSGDL---------PKAKVIHGRARWLYHCEFKNKLLSRA
10	SPARKS	1ljra2	0.127	1.000	0.899	threading_10	MGLELFLVSQPSRAVYIFAKGIPLELRTVDLVKGQHKSKEFLQINSLGKLPKDGDFILTESSAILIYLSCK

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.568 to 1j9iA SCOP code=a.6.1.5	TM-score=0.560 to 1j9iA SCOP code=a.6.1.5	TM-score=0.568 to 1j9iA SCOP code=a.6.1.5	TM-score=0.557 to 1j9iA SCOP code=a.6.1.5	TM-score=0.560 to 1j9iA SCOP code=a.6.1.5