Template-based Modeling Results for YCIU_ECOLI

Submitted Primary Sequence

>Length 109
MDMDLNNRLTEDETLEQAYDIFLELAADNLDPADVLLFNLQFEERGGAELFDPAEDWQEHVDFDLNPDFFAEVVIGLADSEDGEINDVFARILLCREKDHKLCHIIWRE
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MDMDLNNRLTEDETLEQAYDIFLELAADNLDPADVLLFNLQFEERGGAELFDPAEDWQEHVDFDLNPDFFAEVVIGLADSEDGEINDVFARILLCREKDHKLCHIIWRE
CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEECCCCCCHHHHHCCCCCHHHEEEEEEEECCCCCCCHHHHEEEEEECCCCCCCCCEEEECC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MDMDLNNRLTEDETLEQAYDIFLELAADNLDPADVLLFNLQFEERGGAELFDPAEDWQEHVDFDLNPDFFAEVVIGLADSEDGEINDVFARILLCREKDHKLCHIIWRE
5533223312232002200200021024203211001011102521001103123203210313023300010000003343220210001000023442420101125
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MDMDLNNRLTEDETLEQAYDIFLELAADNLDPADVLLFNLQFEERGGAELFDPAEDWQEHVDFDLNPDFFAEVVIGLADSEDGEINDVFARILLCREKDHKLCHIIWRE
1	MUSTER	1nnvA	0.467	0.982	4.363	threading_1	MTTEI-KKLDPDTAIDIAYDIFLEMAGENLDPADILLFNLQFEERGGVEFVETADDWEEEIGVLIDPEEYAEVWVGLVNEQD-EMDDVFAKFLISHREEDREFHVIWKK
2	SPARKS	1nnva	0.458	0.982	4.551	threading_2	MTTEI-KKLDPDTAIDIAYDIFLEMAGENLDPADILLFNLQFEERGGVEFVETADDWEEEIGVLIDPEEYAEVWVGLVNEQ-DEMDDVFAKFLISHREEDREFHVIWKK
3	PROSPECT2	1nnvA	0.467	0.982	2.127	threading_3	MTTEI-KKLDPDTAIDIAYDIFLEMAGENLDPADILLFNLQFEERGGVEFVETADDWEEEIGVLIDPEEYAEVWVGLVNEQD-EMDDVFAKFLISHREEDREFHVIWKK
4	PPA-I	1nnvA	0.449	0.982	7.159	threading_4	-MTTEIKKLDPDTAIDIAYDIFLEMAGENLDPADILLFNLQFEERGGVEFVETADDWEEEIGVLIDPEEYAEVWVGLVNEQ-DEMDDVFAKFLISHREEDREFHVIWKK
5	HHPRED-l	1nnv_A	0.472	0.972	10.690	threading_5	M-TTEIKKLDPDTAIDIAYDIFLEMAGENLDPADILLFNLQFEERGGVEFVETADDWEEEIGVLIDPEEYAEVWVGLVNEQD-EMDDVFAKFLISHREEDREFHVIWK-
6	HHPRED-g	1nnv_A	0.467	0.982	9.398	threading_6	MT-TEIKKLDPDTAIDIAYDIFLEMAGENLDPADILLFNLQFEERGGVEFVETADDWEEEIGVLIDPEEYAEVWVGLVNEQD-EMDDVFAKFLISHREEDREFHVIWKK
7	SP3	1nnva	0.458	0.982	2.379	threading_7	MTTEI-KKLDPDTAIDIAYDIFLEMAGENLDPADILLFNLQFEERGGVEFVETADDWEEEIGVLIDPEEYAEVWVGLVNEQ-DEMDDVFAKFLISHREEDREFHVIWKK
8	SAM-T99	1nnvA	0.458	0.982	7.293	threading_8	-MTTEIKKLDPDTAIDIAYDIFLEMAGENLDPADILLFNLQFEERGGVEFVETADDWEEEIGVLIDPEEYAEVWVGLVN-EQDEMDDVFAKFLISHREEDREFHVIWKK
9	MUSTER	1ltlE1	0.233	0.789	0.659	threading_9	--M---KTVDKSKTLTKFEEFFSL--QD---KDRVFEAIEKYPNVRSIEV-----DYLDLEMF--DPDL-AD---LLIEKPDDVIRAA-ARNIDRLRKNVDL-NIRFSG
10	SPARKS	2cnra	0.177	0.725	0.704	threading_10	MAA------TQEEIVAGLAEIVNEI--AGIPVEDVKL-DKSFTDDLDVSMVEVVVAAEERFDVKIPDDDVKNL---------KTVGDA-TKYILDHQA-----------

Predicted Tertiary Structure


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TM-score=0.972 to 1nnvA SCOP code=d.17.7.1	TM-score=0.972 to 1nnvA SCOP code=d.17.7.1	TM-score=0.969 to 1nnvA SCOP code=d.17.7.1	TM-score=0.972 to 1nnvA SCOP code=d.17.7.1	TM-score=0.978 to 1nnvA SCOP code=d.17.7.1