Template-based Modeling Results for YCGZ_ECOLI

Submitted Primary Sequence

>Length 78
MHQNSVTLDSAGAITRYFAKANLHTQQETLGEIVTEILKDGRNLSRKSLCAKLLCRLEHATGEEEQKHYNALIGLLFE
123456789012345678901234567890123456789012345678901234567890123456789012345678
--------10--------20--------30--------40--------50--------60--------70

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MHQNSVTLDSAGAITRYFAKANLHTQQETLGEIVTEILKDGRNLSRKSLCAKLLCRLEHATGEEEQKHYNALIGLLFE
CCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC
123456789012345678901234567890123456789012345678901234567890123456789012345678
--------10--------20--------30--------40--------50--------60--------70

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MHQNSVTLDSAGAITRYFAKANLHTQQETLGEIVTEILKDGRNLSRKSLCAKLLCRLEHATGEEEQKHYNALIGLLFE
544332223222000200131213112210020011003323312131000100110242223312410210011114
123456789012345678901234567890123456789012345678901234567890123456789012345678
--------10--------20--------30--------40--------50--------60--------70

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MHQNSVTLDSAGAITRYFAKANLHTQQETLGEIVTEILKDGRNLSRKSLCAKLLCRLEHATGEEEQKHYNALIGLLFE
1	MUSTER	2oxlA	0.211	0.731	1.313	threading_1	--------------------NLLEEESAVLGQAVTNLL-SGDNVNNKNIILSLIHSLETTSDILKADVIRKTLEIVLR
2	SPARKS	2oxla	0.211	0.731	1.084	threading_2	--------------------NLLEEESAVLGQAVTNLL-SGDNVNNKNIILSLIHSLETTSDILKADVIRKTLEIVLR
3	PPA-I	2oxlA	0.211	0.731	1.238	threading_3	--------------------NLLEEESAVLGQAVTNLL-SGDNVNNKNIILSLIHSLETTSDILKADVIRKTLEIVLR
4	HHPRED-l	2oxl_A	0.196	0.718	4.552	threading_4	--------------------NLLEEESAVLGQAVTNL-LSGDNVNNKNIILSLIHSLETTSDILKADVIRKTLEIVL-
5	HHPRED-g	2oxl_A	0.193	0.731	3.270	threading_5	--------------------NLLEEESAVLGQAVTNL-LSGDNVNNKNIILSLIHSLETTSDILKADVIRKTLEIVLR
6	SAM-T99	2oxlA	0.211	0.731	1.083	threading_6	--------------------NLLEEESAVLGQAVTNLL-SGDNVNNKNIILSLIHSLETTSDILKADVIRKTLEIVLR
7	MUSTER	1elkA1	0.123	0.936	0.814	threading_7	LLGNPF----SSPVGQRIEKASLQSEDWALNMEICDIINE-TEEGPKDALRAVKKRIVGNKNFHEVMLALTVLETCVK
8	SPARKS	1e7la1	0.130	0.692	0.764	threading_8	-----IHPNFVGDKSKEFSRLG---KEEMMAEMLQRGFEYNESDTKTQLIASFKKQLRKSLK----------------
9	PROSPECT2	3bjdA1	0.103	1.000	0.711	threading_9	NTRNNLPIEEARIVADALAVHATSRQIDSAASKLAALAEAKGDRQAYAAYQQLLYVLSLSDDVATAQTRRWLARAIYF
10	PPA-I	1elkA1	0.105	0.974	0.732	threading_10	LLGNPFSSPVGQRIEKATDGSLQSEDWALNMEICDIINET--EEGPKDALRAVKKRIVGNKNFHEVMLALTVLETCVK

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.533 to 1e9sF SCOP code=c.37.1.11	TM-score=0.436 to 2cx6A SCOP code=c.9.1.1	TM-score=0.533 to 1e9sF SCOP code=c.37.1.11	TM-score=0.533 to 1e9sF SCOP code=c.37.1.11	TM-score=0.526 to 1z0jB SCOP code=a.2.19.1