Template-based Modeling Results for YAJC_ECOLI

Submitted Primary Sequence

>Length 110
MSFFISDAVAATGAPAQGSPMSLILMLVVFGLIFYFMILRPQQKRTKEHKKLMDSIAKGDEVLTNGGLVGRVTKVAENGYIAIALNDTTEVVIKRDFVAAVLPKGTMKAL
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSFFISDAVAATGAPAQGSPMSLILMLVVFGLIFYFMILRPQQKRTKEHKKLMDSIAKGDEVLTNGGLVGRVTKVAENGYIAIALNDTTEVVIKRDFVAAVLPKGTMKAL
CCCCCCHHHHCCCCCCCCCCEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEECCCEEEEEEEECCCCEEEEEECCCEEEEEEHHHHHHHCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSFFISDAVAATGAPAQGSPMSLILMLVVFGLIFYFMILRPQQKRTKEHKKLMDSIAKGDEVLTNGGLVGRVTKVAENGYIAIALNDTTEVVIKRDFVAAVLPKGTMKAL
54110020001111113221010000000000000011122223323313301330231110001100001002024322000101330101020200121123222424
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110

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Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSFFISDAVAATGAPAQGSPMSLILMLVVFGLIFYFMILRPQQKRTKEHKKLMDSIAKGDEVLTNGGLVGRVTKVAENGYIAIALNDTTEVVIKRDFVAAVLPKGTMKAL
1	MUSTER	2rddB	1.000	0.336	1.011	threading_1	------------------SPMSLILMLVVFGLIFYFMILRPQQKRTKEHKKLMDS-------------------------------------------------------
2	PPA-I	2rddB	1.000	0.336	2.702	threading_2	------------------SPMSLILMLVVFGLIFYFMILRPQQKRTKEHKKLMDS-------------------------------------------------------
3	HHPRED-l	2rdd_B	1.000	0.336	3.364	threading_3	------------------SPMSLILMLVVFGLIFYFMILRPQQKRTKEHKKLMDS-------------------------------------------------------
4	HHPRED-g	2rdd_B	1.000	0.336	3.812	threading_4	------------------SPMSLILMLVVFGLIFYFMILRPQQKRTKEHKKLMDS-------------------------------------------------------
5	SAM-T99	2rddB	1.000	0.336	2.110	threading_5	------------------SPMSLILMLVVFGLIFYFMILRPQQKRTKEHKKLMDS-------------------------------------------------------
6	PPA-I	3qiiA	0.208	0.436	1.411	threading_6	------------------------------------------------------EFQINEQVLACDCYPAKVTAVNKDGTYTVKFYDGVVQTVKHIHVKAFS--------
7	HHPRED-g	2rdd_B	0.081	0.336	1.927	threading_7	---------------------SPMSLILMLVVFGLIFYFMILRPQQKRTKEHKKLMDS----------------------------------------------------
8	PPA-I	2wg6L	0.114	0.636	1.301	threading_8	-------------------------------MKQLEDKVEELLSKNYHLENEVARLRS------APLLVGVVSDILEDGRVVVKSSTGPKFVVN---TSQYINEEELKPG
9	PPA-I	2vv5A1	0.211	0.818	1.199	threading_9	VGVQTASVIAVLGAAGLVVGLALQGSLSNLAAGVLLVMFRP--------------FRAGEYVDL-GGVAGTVLSVQ-IFSTTMRTADGKIIVIPNGKIIA----GNIINF
10	PPA-I	2equA	0.141	0.582	1.102	threading_10	----------------------------------------------GSSGSSGFDFKAGEEVLARWTYPAKIEAINKEGTFTVQFYDGVIRCLKRMHIKAMPEDAKGQDW

Predicted Tertiary Structure


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TM-score=0.454 to 1kv4A SCOP code=j.4.1.3	TM-score=0.454 to 1kv4A SCOP code=j.4.1.3	TM-score=0.454 to 1kv4A SCOP code=j.4.1.3	TM-score=0.454 to 1kv4A SCOP code=j.4.1.3	TM-score=0.454 to 1kv4A SCOP code=j.4.1.3