Template-based Modeling Results for YAHO_ECOLI

Submitted Primary Sequence

>Length 91
MKIISKMLVGALALAVTNVYAAELMTKAEFEKVESQYEKIGDISTSNEMSTADAKEDLIKKADEKGADVLVLTSGQTDNKIHGTANIYKKK
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--------10--------20--------30--------40--------50--------60--------70--------80--------90

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKIISKMLVGALALAVTNVYAAELMTKAEFEKVESQYEKIGDISTSNEMSTADAKEDLIKKADEKGADVLVLTSGQTDNKIHGTANIYKKK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEEEEEECCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKIISKMLVGALALAVTNVYAAELMTKAEFEKVESQYEKIGDISTSNEMSTADAKEDLIKKADEKGADVLVLTSGQTDNKIHGTANIYKKK
4321011010000000000100210122213313331221010002332012201320031045331200000102333301010101356
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--------10--------20--------30--------40--------50--------60--------70--------80--------90

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MKIISKMLVGALALAVTNVYAAELMTKAEFEKVESQYEKIGDISTSNEMSTADAKEDLIKKADEKGADVLVLTSGQTDNKIHGTANIYKKK
1	MUSTER	2nocA	0.725	1.000	3.029	threading_1	MKTGYKVMLGALAFVVTNVYAAEIMKKTDFDKVASEYTKIGTISTTGEMSPLDAREDLIKKADEKGADVVVLTSGQTENKIHGTADIYKKK
2	SPARKS	2noca	0.725	1.000	2.728	threading_2	MKTGYKVMLGALAFVVTNVYAAEIMKKTDFDKVASEYTKIGTISTTGEMSPLDAREDLIKKADEKGADVVVLTSGQTENKIHGTADIYKKK
3	PROSPECT2	2nocA	0.725	1.000	1.219	threading_3	MKTGYKVMLGALAFVVTNVYAAEIMKKTDFDKVASEYTKIGTISTTGEMSPLDAREDLIKKADEKGADVVVLTSGQTENKIHGTADIYKKK
4	PPA-I	2nocA	0.725	1.000	3.352	threading_4	MKTGYKVMLGALAFVVTNVYAAEIMKKTDFDKVASEYTKIGTISTTGEMSPLDAREDLIKKADEKGADVVVLTSGQTENKIHGTADIYKKK
5	HHPRED-l	2noc_A	0.722	0.989	6.956	threading_5	MKTGYKVMLGALAFVVTNVYAAEIMKKTDFDKVASEYTKIGTISTTGEMSPLDAREDLIKKADEKGADVVVLTSGQTENKIHGTADIYKK-
6	HHPRED-g	2noc_A	0.725	1.000	5.804	threading_6	MKTGYKVMLGALAFVVTNVYAAEIMKKTDFDKVASEYTKIGTISTTGEMSPLDAREDLIKKADEKGADVVVLTSGQTENKIHGTADIYKKK
7	SP3	2noca	0.725	1.000	2.499	threading_7	MKTGYKVMLGALAFVVTNVYAAEIMKKTDFDKVASEYTKIGTISTTGEMSPLDAREDLIKKADEKGADVVVLTSGQTENKIHGTADIYKKK
8	SAM-T99	2nocA	0.725	1.000	4.004	threading_8	MKTGYKVMLGALAFVVTNVYAAEIMKKTDFDKVASEYTKIGTISTTGEMSPLDAREDLIKKADEKGADVVVLTSGQTENKIHGTADIYKKK
9	MUSTER	2jnaA	0.247	0.978	2.374	threading_9	MKKRIIAAALLATVASFSTLAAEQVSKQEISHFK--LVKVGTINVSQSGSPSDLREKLSELADAKGGKYYHIIAAREHGNFEAVAEVYNDA
10	SPARKS	2jnaa	0.247	0.978	2.585	threading_10	MKKRIIAAALLATVASFSTLAAEQVSKQEISHF--KLVKVGTINVSQSGSPSDLREKLSELADAKGGKYYHIIAARHGPNFEAVAEVYNDA

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.804 to 2nocA SCOP code=d.230.6.1	TM-score=0.789 to 2nocA SCOP code=d.230.6.1	TM-score=0.789 to 2nocA SCOP code=d.230.6.1	TM-score=0.804 to 2nocA SCOP code=d.230.6.1	TM-score=0.804 to 2nocA SCOP code=d.230.6.1