Template-based Modeling Results for UMUD_ECOLI

Submitted Primary Sequence

>Length 139
MLFIKPADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPTVQLIPMNSAYSPITISSEDTLDVFGVVIHVVKAMR
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MLFIKPADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPTVQLIPMNSAYSPITISSEDTLDVFGVVIHVVKAMR
CCCEECCCCCCEEEEEEECCEEECCCCCCCCCCCCEEEECCHHHCCCCCCEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEECCEEEEEEEEECCEEEEEECCCCCCCEECCCCCCEEEEEEEEEEEEECC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MLFIKPADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPTVQLIPMNSAYSPITISSEDTLDVFGVVIHVVKAMR
3442212324210200001210001110202221212010132003232100001021211121001200000012222123110000003220001102133100000212312102023432010000001002225
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MLFIKPADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPTVQLIPMNSAYSPITISSEDTLDVFGVVIHVVKAMR
1	MUSTER	1jhhA2	0.331	0.871	3.456	threading_1	--------------LPLVG-RVAAGEPLLAQQHIEGHYQVDPSLF-KPNADFLLRVSGMAMKDIGIMDGDLLAVHKTQDVRNGQVVVARIDDEVTVKRLKKQNKVELLPENSEFKPIVVLRQQSFTIEGLAVGVIRN--
2	SPARKS	3k2za	0.311	0.950	5.226	threading_2	LRISKSIRN----KIPLIG-EIRAGEKREAIEYLEDYIEIPESFLSSGYDHFLLKVKGESMIEEHICDGDLVLVRRQDWAQNGDIVAAMVDGEVTLAKFYQRGTVELRPANREMSSMFFRA-EKVKILGKVVGVFRKL-
3	PROSPECT2	3k2zA2	0.315	0.892	2.238	threading_3	N------------KIPLIG-EIRAGEKREAIEYLEDYIEIPESFLSSGYDHFLLKVKGESMIEEHICDGDLVLVRRQDWAQNGDIVAAMVDGEVTLAKFYQGDTVELRPANREMSSMFFRA-EKVKILGKVVGVFRKL-
4	PPA-I	1i4vA	0.991	0.827	4.381	threading_4	------------------------AFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPTVQLIPMNSAYSPITISSEDTLDVFGVVIHVVKAMR
5	HHPRED-l	1umu_A	1.000	0.741	5.566	threading_5	-------------------------------DYVEQRIDLNQLLIQHPSATYFVKASGDS-IDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPTVQLIP-NSAYSPITISSEDTLDVFGVVIHVVK---
6	HHPRED-g	1umu_A	1.000	0.741	5.982	threading_6	-------------------------------DYVEQRIDLNQLLIQHPSATYFVKASGDS-IDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPTVQLIP-NSAYSPITISSEDTLDVFGVVIHVVK---
7	SP3	3k2za	0.311	0.950	5.287	threading_7	LRISKSIRN----KIPLIG-EIRAGEKREAIEYLEDYIEIPESFLSSGYDHFLLKVKGESMIEEHICDGDLVLVRRQDWAQNGDIVAAMVDGEVTLAKFYQRGTVELRPANREMSSMFFRA-EKVKILGKVVGVFRKL-
8	SAM-T99	1i4vA	1.000	0.820	4.829	threading_8	-------------------------FPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPTVQLIPMNSAYSPITISSEDTLDVFGVVIHVVKAMR
9	MUSTER	3k2zA2	0.323	0.892	3.388	threading_9	------------NKIPLIG-EIRAGEKREAIEYLEDYIEIPESFLSSGYDHFLLKVKGESMIEEHICDGDLVLVRRQDWAQNGDIVAAMVDGEVTLAKFYQRGTVELRPANREMSSMFFRA-EKVKILGKVVGVFRKL-
10	SPARKS	1jhfa2	0.323	0.892	4.609	threading_10	-----------EEGLPLVG-RVAADEPLLAQQHIEGHYQVDPSLFK-PNADFLLRVSGMSMKDIGIMDGDLLAVHKTQDVRNGQVVVARIDDEVTVKRLKKQGKVELLPENSEFKPIVVDRQQSFTIEGLAVGVIRN--

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.918 to 1jhhA TM-score=0.797 to native SCOP code=a.4.5.2	TM-score=0.793 to 1jhhA TM-score=0.830 to native SCOP code=a.4.5.2	TM-score=0.788 to 1jhhA TM-score=0.806 to native SCOP code=a.4.5.2	TM-score=0.791 to 1jhhA TM-score=0.797 to native SCOP code=a.4.5.2	TM-score=0.816 to 1i4vA TM-score=0.640 to native SCOP code=b.87.1.1

Experimental Structure

Download 1ay9A

SCOP code=b.87.1.1