Template-based Modeling Results for SECG_ECOLI

Submitted Primary Sequence

>Length 110
MYEALLVVFLIVAIGLVGLIMLQQGKGADMGASFGAGASATLFGSSGSGNFMTRMTALLATLFFIISLVLGNINSNKTNKGSEWENLSAPAKTEQTQPAAPAKPTSDIPN
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MYEALLVVFLIVAIGLVGLIMLQQGKGADMGASFGAGASATLFGSSGSGNFMTRMTALLATLFFIISLVLGNINSNKTNKGSEWENLSAPAKTEQTQPAAPAKPTSDIPN
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MYEALLVVFLIVAIGLVGLIMLQQGKGADMGASFGAGASATLFGSSGSGNFMTRMTALLATLFFIISLVLGNINSNKTNKGSEWENLSAPAKTEQTQPAAPAKPTSDIPN
44201110110000000000012203113100010110111110121002000100000000000000000102223233223233122324233233222243223148
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MYEALLVVFLIVAIGLVGLIMLQQGKGADMGASFGAGASATLFGSSGSGNFMTRMTALLATLFFIISLVLGNINSNKTNKGSEWENLSAPAKTEQTQPAAPAKPTSDIPN
1	MUSTER	2akhX	1.000	0.700	2.351	threading_1	MYEALLVVFLIVAIGLVGLIMLQQGKGADMGASFGAGASATLFGSSGSGNFMTRMTALLATLFFIISLVLGNINSNK---------------------------------
2	SPARKS	3dl8e	0.385	0.591	1.740	threading_2	-------LFVIIAVVLIISTLLQKGRG-DVGAAFGGGMGQSIFGVGGVETILTKATYWLGALFLVLALLLSVI-------------------------------------
3	PROSPECT2	2akhX	1.000	0.700	1.080	threading_3	MYEALLVVFLIVAIGLVGLIMLQQGKGADMGASFGAGASATLFGSSGSGNFMTRMTALLATLFFIISLVLGNINSNK---------------------------------
4	PPA-I	2akhX	1.000	0.700	2.825	threading_4	MYEALLVVFLIVAIGLVGLIMLQQGKGADMGASFGAGASATLFGSSGSGNFMTRMTALLATLFFIISLVLGNINSNK---------------------------------
5	HHPRED-l	2akh_X	1.000	0.700	6.245	threading_5	MYEALLVVFLIVAIGLVGLIMLQQGKGADMGASFGAGASATLFGSSGSGNFMTRMTALLATLFFIISLVLGNINSNK---------------------------------
6	HHPRED-g	2akh_X	1.000	0.700	5.676	threading_6	MYEALLVVFLIVAIGLVGLIMLQQGKGADMGASFGAGASATLFGSSGSGNFMTRMTALLATLFFIISLVLGNINSNK---------------------------------
7	SP3	3dl8e	0.385	0.591	0.936	threading_7	-------LFVIIAVVLIISTLLQKGRG-DVGAAFGGGMGQSIFGVGGVETILTKATYWLGALFLVLALLLSVI-------------------------------------
8	SAM-T99	2akhX	1.000	0.700	5.603	threading_8	MYEALLVVFLIVAIGLVGLIMLQQGKGADMGASFGAGASATLFGSSGSGNFMTRMTALLATLFFIISLVLGNINSNK---------------------------------
9	MUSTER	3dinE	0.262	0.591	1.525	threading_9	--------HTIISVALIYMVQVQMSKFSELGGAFGSGGLHTVFGRRKGLDTGGKITLVLSVLFFVSCVVTAFV-------------------------------------
10	SPARKS	3dine	0.262	0.591	1.460	threading_10	--------HTIISVALIYMVQVQMSKFSELGGAFGSGGLHTVFGRRKGLDTGGKITLVLSVLFFVSCVVTAFV-------------------------------------

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.472 to 1ysmA SCOP code=a.2.16.1	TM-score=0.472 to 1ysmA SCOP code=a.2.16.1	TM-score=0.510 to 1ku9A SCOP code=a.4.5.36	TM-score=0.472 to 1ysmA SCOP code=a.2.16.1	TM-score=0.472 to 1ysmA SCOP code=a.2.16.1