Template-based Modeling Results for DHSC_ECOLI

Submitted Primary Sequence

>Length 129
MIRNVKKQRPVNLDLQTIRFPITAIASILHRVSGVITFVAVGILLWLLGTSLSSPEGFEQASAIMGSFFVKFIMWGILTALAYHVVVGIRHMMMDFGYLEETFEAGKRSAKISFVITVVLSLLAGVLVW
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MIRNVKKQRPVNLDLQTIRFPITAIASILHRVSGVITFVAVGILLWLLGTSLSSPEGFEQASAIMGSFFVKFIMWGILTALAYHVVVGIRHMMMDFGYLEETFEAGKRSAKISFVITVVLSLLAGVLVW
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MIRNVKKQRPVNLDLQTIRFPITAIASILHRVSGVITFVAVGILLWLLGTSLSSPEGFEQASAIMGSFFVKFIMWGILTALAYHVVVGIRHMMMDFGYLEETFEAGKRSAKISFVITVVLSLLAGVLVW
554224332210120210302010000000200000000000000000000111220021002000100010000000000000000000000000011330121012001000000000010000112
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MIRNVKKQRPVNLDLQTIRFPITAIASILHRVSGVITFVAVGILLWLLGTSLSSPEGFEQASAIMGSFFVKFIMWGILTALAYHVVVGIRHMMMDFGYLEETFEAGKRSAKISFVITVVLSLLAGVLVW
1	MUSTER	1nekC	1.000	1.000	4.307	threading_1	MIRNVKKQRPVNLDLQTIRFPITAIASILHRVSGVITFVAVGILLWLLGTSLSSPEGFEQASAIMGSFFVKFIMWGILTALAYHVVVGIRHMMMDFGYLEETFEAGKRSAKISFVITVVLSLLAGVLVW
2	SPARKS	1nekc	1.000	1.000	6.982	threading_2	MIRNVKKQRPVNLDLQTIRFPITAIASILHRVSGVITFVAVGILLWLLGTSLSSPEGFEQASAIMGSFFVKFIMWGILTALAYHVVVGIRHMMMDFGYLEETFEAGKRSAKISFVITVVLSLLAGVLVW
3	PROSPECT2	1nekc	1.000	1.000	2.491	threading_3	MIRNVKKQRPVNLDLQTIRFPITAIASILHRVSGVITFVAVGILLWLLGTSLSSPEGFEQASAIMGSFFVKFIMWGILTALAYHVVVGIRHMMMDFGYLEETFEAGKRSAKISFVITVVLSLLAGVLVW
4	PPA-I	1nekC	1.000	1.000	5.155	threading_4	MIRNVKKQRPVNLDLQTIRFPITAIASILHRVSGVITFVAVGILLWLLGTSLSSPEGFEQASAIMGSFFVKFIMWGILTALAYHVVVGIRHMMMDFGYLEETFEAGKRSAKISFVITVVLSLLAGVLVW
5	HHPRED-l	2h88_C	0.183	0.977	6.704	threading_5	WEKNTKSSRPLSPHISIYKWSLPMAMSITHRGTGVALSLGVSLFSLAALLLPEQFPHYVAVVKSLSPALIYSAKFALVFPLSYHTWNGIRHLVWDMGKGFK-LSQVEQSGVVVLILTLLSSAAIASE--
6	HHPRED-g	2h88_C	0.183	0.977	6.296	threading_6	WEKNTKSSRPLSPHISIYKWSLPMAMSITHRGTGVALSLGVSLFSLAALLLPEQFPHYVAVVKSLSPALIYSAKFALVFPLSYHTWNGIRHLVWDMGKGFKLSQV-EQSGVVVLILTLLSSAAIASE--
7	SP3	1nekc	1.000	1.000	5.391	threading_7	MIRNVKKQRPVNLDLQTIRFPITAIASILHRVSGVITFVAVGILLWLLGTSLSSPEGFEQASAIMGSFFVKFIMWGILTALAYHVVVGIRHMMMDFGYLEETFEAGKRSAKISFVITVVLSLLAGVLVW
8	SAM-T99	1nekC	1.000	1.000	6.556	threading_8	MIRNVKKQRPVNLDLQTIRFPITAIASILHRVSGVITFVAVGILLWLLGTSLSSPEGFEQASAIMGSFFVKFIMWGILTALAYHVVVGIRHMMMDFGYLEETFEAGKRSAKISFVITVVLSLLAGVLVW
9	MUSTER	2fbwC	0.181	0.984	3.208	threading_9	WEKNTKSSRPLSPHISIYKWSLPMAMSITHRGTGVALSLGVSLFSVAALLLPEQFPHYVAVVKSLSPALIYSAKFALVFPLSYHTWNGIRHLVWDMGKGFK-LSQVEQSGVVVLILTLLSSAGIAAIS-
10	SPARKS	1zoyc	0.214	0.977	5.755	threading_10	WNKNLGSNRPLSPHITIYRWSLPMAMSICHRGTGIALSAGVSLFGLSALLLPGNFESHLELVKCLGPTLIYTAKFGIVFPLMYHTWNGIRHLIWDLGKGLT-IPQLTQSGVVVLILTVLSSVGLAAM--

Predicted Tertiary Structure


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TM-score=0.892 to 1nekC TM-score=0.892 to native SCOP code=f.21.2.2	TM-score=0.892 to 1nekC TM-score=0.892 to native SCOP code=f.21.2.2	TM-score=0.892 to 1nekC TM-score=0.892 to native SCOP code=f.21.2.2	TM-score=0.892 to 1nekC TM-score=0.892 to native SCOP code=f.21.2.2	TM-score=0.892 to 1nekC TM-score=0.892 to native SCOP code=f.21.2.2

Experimental Structure

Download 1nekC

SCOP code=f.21.2.2