Template-based Modeling Results for RL33_ECOLI

Submitted Primary Sequence

>Length 55
MAKGIREKIKLVSSAGTGHFYTTTKNKRTKPEKLELKKFDPVVRQHVIYKEAKIK
1234567890123456789012345678901234567890123456789012345
--------10--------20--------30--------40--------50

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MAKGIREKIKLVSSAGTGHFYTTTKNKRTKPEKLELKKFDPVVRQHVIYKEAKIK
CCCCCCEEEEEEEECCCCEEEEEECCCCCCCCEEEEEECCCCCCEEEEEEEEECC
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--------10--------20--------30--------40--------50

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MAKGIREKIKLVSSAGTGHFYTTTKNKRTKPEKLELKKFDPVVRQHVIYKEAKIK
5443222101000122211000022244343210202201320111020222336
1234567890123456789012345678901234567890123456789012345
--------10--------20--------30--------40--------50

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MAKGIREKIKLVSSAGTGHFYTTTKNKRTKPEKLELKKFDPVVRQHVIYKEAKIK
1	MUSTER	2vhm1	1.000	0.982	4.760	threading_1	-AKGIREKIKLVSSAGTGHFYTTTKNKRTKPEKLELKKFDPVVRQHVIYKEAKIK
2	SPARKS	1nkw1	0.547	0.964	7.121	threading_2	AKDGPRIIVKMESSAGTGFYYTTTKNRRNTQAKLELKKYDPVAKKHVVFREKK--
3	PROSPECT2	1nkw1	0.547	0.964	0.943	threading_3	AKDGPRIIVKMESSAGTGFYYTTTKNRRNTQAKLELKKYDPVAKKHVVFRE--KK
4	PPA-I	2vhm1	1.000	0.982	7.893	threading_4	-AKGIREKIKLVSSAGTGHFYTTTKNKRTKPEKLELKKFDPVVRQHVIYKEAKIK
5	HHPRED-l	1nkw_1	0.596	0.945	4.346	threading_5	-AKGPRIIVKMESSAGTGFYYTTTKNRRNTQAKLELKKYDPVAKKHVVFREKK--
6	HHPRED-g	2j01_6	0.386	0.800	4.154	threading_6	--------LLLECTECKRRNYATEKNKRNTPNKLELRKYCPWCRKHTVHREV---
7	SP3	1nkw1	0.547	0.964	2.839	threading_7	AKDGPRIIVKMESSAGTGFYYTTTKNRRNTQAKLELKKYDPVAKKHVVFREKK--
8	SAM-T99	2vhm1	1.000	0.982	3.642	threading_8	-AKGIREKIKLVSSAGTGHFYTTTKNKRTKPEKLELKKFDPVVRQHVIYKEAKIK
9	MUSTER	2awb1	1.000	0.982	4.668	threading_9	-AKGIREKIKLVSSAGTGHFYTTTKNKRTKPEKLELKKFDPVVRQHVIYKEAKIK
10	SPARKS	2k57a	0.130	0.836	1.258	threading_10	--MASPTVITLN----DGREIQAVDTPKEESGFYEFKQLD---GKQTRINKDQVR

Predicted Tertiary Structure


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TM-score=0.962 to 2vhm1 TM-score=0.847 to native SCOP code=i.1.1.1	TM-score=0.962 to 2vhm1 TM-score=0.847 to native SCOP code=i.1.1.1	TM-score=0.867 to 1xbp1 TM-score=0.659 to native SCOP code=g.41.8.6	TM-score=0.893 to 1xbp1 TM-score=0.648 to native SCOP code=g.41.8.6	TM-score=0.962 to 2vhm1 TM-score=0.847 to native SCOP code=i.1.1.1

Experimental Structure

Download 1vs61

SCOP code=i.1.1.1