Template-based Modeling Results for RL29_ECOLI

Submitted Primary Sequence

>Length 63
MKAKELREKSVEELNTELLNLLREQFNLRMQAASGQLQQSHLLKQVRRDVARVKTLLNEKAGA
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--------10--------20--------30--------40--------50--------60

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKAKELREKSVEELNTELLNLLREQFNLRMQAASGQLQQSHLLKQVRRDVARVKTLLNEKAGA
CCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKAKELREKSVEELNTELLNLLREQFNLRMQAASGQLQQSHLLKQVRRDVARVKTLLNEKAGA
442321342223202410230032002010111122133121033012100202111223235
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--------10--------20--------30--------40--------50--------60

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MKAKELREKSVEELNTELLNLLREQFNLRMQAASGQLQQSHLLKQVRRDVARVKTLLNEKAGA
1	MUSTER	1r73A	0.444	1.000	3.578	threading_1	MKASELRNYTDEELKNLLEEKKRQLMELRFQLAMGQLKNTSLIKLTKRDIARIKTILRERELG
2	SPARKS	1p85w	1.000	0.952	3.395	threading_2	MKAKELREKSVEELNTELLNLLREQFNLRMQAASGQLQQSHLLKQVRRDVARVKTLLNEK---
3	PROSPECT2	1r73A	0.444	1.000	1.356	threading_3	MKASELRNYTDEELKNLLEEKKRQLMELRFQLAMGQLKNTSLIKLTKRDIARIKTILRERERR
4	PPA-I	1r73A	0.444	1.000	5.504	threading_4	MKASELRNYTDEELKNLLEEKKRQLMELRFQLAMGQLKNTSLIKLTKRDIARIKTILRERELG
5	HHPRED-l	1r73_A	0.452	0.984	3.729	threading_5	MKASELRNYTDEELKNLLEEKKRQLMELRFQLAMGQLKNTSLIKLTKRDIARIKTILREREL-
6	HHPRED-g	1r73_A	0.444	1.000	3.115	threading_6	MKASELRNYTDEELKNLLEEKKRQLMELRFQLAMGQLKNTSLIKLTKRDIARIKTILRERELG
7	SP3	1p85w	1.000	0.952	3.592	threading_7	MKAKELREKSVEELNTELLNLLREQFNLRMQAASGQLQQSHLLKQVRRDVARVKTLLNEK---
8	SAM-T99	2qamX	1.000	1.000	3.633	threading_8	MKAKELREKSVEELNTELLNLLREQFNLRMQAASGQLQQSHLLKQVRRDVARVKTLLNEKAGA
9	MUSTER	3cmaV	0.290	0.984	3.117	threading_9	LHVQEIRDMTPAEREAELDDLKTELLNARAVQAAGAPENPGRIKELRKAIARIKTIQGEEGD-
10	SPARKS	1jj2u	0.290	0.984	3.001	threading_10	LHVQEIRDMTPAEREAELDDLKTELLNARAVQAGGAPENPGRIKELRKAIARIKTIQGEEGD-

Predicted Tertiary Structure


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TM-score=0.949 to 1r73A TM-score=0.530 to native SCOP code=a.2.2.1	TM-score=0.945 to 1r73A TM-score=0.535 to native SCOP code=a.2.2.1	TM-score=0.855 to 3cmaV TM-score=0.580 to native SCOP code=i.1.1.2	TM-score=0.928 to 1r73A TM-score=0.524 to native SCOP code=a.2.2.1	TM-score=0.949 to 1r73A TM-score=0.530 to native SCOP code=a.2.2.1

Experimental Structure

Download 1vs6X

SCOP code=a.2.2.1