Template-based Modeling Results for NUDB_ECOLI

Submitted Primary Sequence

>Length 150
MKDKVYKRPVSILVVIYAQDTKRVLMLQRRDDPDFWQSVTGSVEEGETAPQAAMREVKEEVTIDVVAEQLTLIDCQRTVEFEIFSHLRHRYAPGVTRNTESWFCLALPHERQIVFTEHLAYKWLDAPAAAALTKSWSNRQAIEQFVINAA
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKDKVYKRPVSILVVIYAQDTKRVLMLQRRDDPDFWQSVTGSVEEGETAPQAAMREVKEEVTIDVVAEQLTLIDCQRTVEFEIFSHLRHRYAPGVTRNTESWFCLALPHERQIVFTEHLAYKWLDAPAAAALTKSWSNRQAIEQFVINAA
CCCCCCCCCCEEEEEEEECCCCEEEEEEECCCCCCEECCCCEECCCCCHHHHHHHHHHHHHCCCCCCCEEEEECHHHCCCCCCEEEECCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCEEEECCHHHHHHHCCCHHHHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKDKVYKRPVSILVVIYAQDTKRVLMLQRRDDPDFWQSVTGSVEEGETAPQAAMREVKEEVTIDVVAEQLTLIDCQRTVEFEIFSHLRHRYAPGVTRNTESWFCLALPHERQIVFTEHLAYKWLDAPAAAALTKSWSNRQAIEQFVINAA
554322332100000000332320000111232310100201013232012000220142022322221000010321132310100113123112101100000012332322122111000010200021021220130022002315
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MKDKVYKRPVSILVVIYAQDTKRVLMLQRRDDPDFWQSVTGSVEEGETAPQAAMREVKEEVTIDVVAEQLTLIDCQRTVEFEIFSHLRHRYAPGVTRNTESWFCLALPHERQIVFTEHLAYKWLDAPAAAALTKSWSNRQAIEQFVINAA
1	MUSTER	2o1cA	1.000	0.980	3.829	threading_1	-KDKVYKRPVSILVVIYAQDTKRVLMLQRRDDPDFWQSVTGSVEEGETAPQAAMREVKEEVTIDVVAEQLTLIDCQRTVEFEIFSHLRHRYAPGVTRNTESWFCLALPHERQIVFTEHLAYKWLDAPAAAALTKSWSNRQAIEQFVIN--
2	SPARKS	2o1ca	1.000	0.980	3.560	threading_2	-KDKVYKRPVSILVVIYAQDTKRVLMLQRRDDPDFWQSVTGSVEEGETAPQAAMREVKEEVTIDVVAEQLTLIDCQRTVEFEIFSHLRHRYAPGVTRNTESWFCLALPHERQIVFTEHLAYKWLDAPAAAALTKSWSNRQAIEQFVIN--
3	PROSPECT2	2o1cA	0.986	0.980	2.418	threading_3	-KDKVYKRPVSILVVIYAQDTKRVLMLQRRDDPDFWQSVTGSVEEGETAPQAAMREVKEEVTIDVVAEQLTLIDCQRTVEFEIFSHLRHRYAPGVTRNTESWFCLALPHERQIVFTEHLAYKWLDAPAAAALTKSWSNRQAIEQFV--IN
4	PPA-I	2o1cA	1.000	0.980	3.763	threading_4	-KDKVYKRPVSILVVIYAQDTKRVLMLQRRDDPDFWQSVTGSVEEGETAPQAAMREVKEEVTIDVVAEQLTLIDCQRTVEFEIFSHLRHRYAPGVTRNTESWFCLALPHERQIVFTEHLAYKWLDAPAAAALTKSWSNRQAIEQFVIN--
5	HHPRED-l	2o1c_A	1.000	0.980	2.856	threading_5	-KDKVYKRPVSILVVIYAQDTKRVLMLQRRDDPDFWQSVTGSVEEGETAPQAAMREVKEEVTIDVVAEQLTLIDCQRTVEFEIFSHLRHRYAPGVTRNTESWFCLALPHERQIVFTEHLAYKWLDAPAAAALTKSWSNRQAIEQFVIN--
6	HHPRED-g	2o1c_A	1.000	0.980	2.703	threading_6	-KDKVYKRPVSILVVIYAQDTKRVLMLQRRDDPDFWQSVTGSVEEGETAPQAAMREVKEEVTIDVVAEQLTLIDCQRTVEFEIFSHLRHRYAPGVTRNTESWFCLALPHERQIVFTEHLAYKWLDAPAAAALTKSWSNRQAIEQFVIN--
7	SP3	2o1ca	1.000	0.980	3.437	threading_7	-KDKVYKRPVSILVVIYAQDTKRVLMLQRRDDPDFWQSVTGSVEEGETAPQAAMREVKEEVTIDVVAEQLTLIDCQRTVEFEIFSHLRHRYAPGVTRNTESWFCLALPHERQIVFTEHLAYKWLDAPAAAALTKSWSNRQAIEQFVIN--
8	SAM-T99	2o1cA	1.000	0.973	2.961	threading_8	-KDKVYKRPVSILVVIYAQDTKRVLMLQRRDDPDFWQSVTGSVEEGETAPQAAMREVKEEVTIDVVAEQLTLIDCQRTVEFEIFSHLRHRYAPGVTRNTESWFCLALPHERQIVFTEHLAYKWLDAPAAAALTKSWSNRQAIEQFVI---
9	MUSTER	1f3yA	0.199	0.973	2.608	threading_9	MDSPGYRR--NVGICLMN-NDKKIFAASRLDIPDAWQMPQGGIDEGEDPRNAAIRELREETGVTSAEVIAEVPYWTYDFPPKVREKLNIQWGSDWKGQAQKWFLFKFTGQDEINLLEFGEWSWVTPEQLIDLTVEFK-KPVYKEVLSVFA
10	SPARKS	2kdva	0.200	0.967	2.913	threading_10	IDDDGYRPNVGIVIC---NRQGQVMWARRF-GQHSWQFPQGGINPGESAEQAMYRELFEEVGLSRKDVRILASTRNWLRYKLPKRLVRWDTKPVCIGQKQKWFLLQLVSGDAEINPEFDGWRWVSYWYPVRQVV-SFKRDVYRRVMKEFA

Predicted Tertiary Structure


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TM-score=0.781 to 1ktgA TM-score=0.998 to native SCOP code=d.113.1.1	TM-score=0.340 to 1osnA TM-score=0.200 to native SCOP code=c.37.1.1	TM-score=0.781 to 1ktgA TM-score=0.998 to native SCOP code=d.113.1.1	TM-score=0.781 to 1ktgA TM-score=0.998 to native SCOP code=d.113.1.1	TM-score=0.781 to 1ktgA TM-score=0.998 to native SCOP code=d.113.1.1

Experimental Structure

Download 2o1cA

SCOP code=d.113.1.1