Template-based Modeling Results for NRFF_ECOLI

Submitted Primary Sequence

>Length 127
MNKGLLTLLLLFTCFAHAQVVDTWQFANPQQQQQALNIASQLRCPQCQNQNLLESNAPVAVSMRHQVYSMVAEGKNEVEIIGWMTERYGDFVRYNPPLTGQTLVLWALPVVLLLLMALILWRVRAKR
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MNKGLLTLLLLFTCFAHAQVVDTWQFANPQQQQQALNIASQLRCPQCQNQNLLESNAPVAVSMRHQVYSMVAEGKNEVEIIGWMTERYGDFVRYNPPLTGQTLVLWALPVVLLLLMALILWRVRAKR
CHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MNKGLLTLLLLFTCFAHAQVVDTWQFANPQQQQQALNIASQLRCPQCQNQNLLESNAPVAVSMRHQVYSMVAEGKNEVEIIGWMTERYGDFVRYNPPLTGQTLVLWALPVVLLLLMALILWRVRAKR
4110010000000000002113223122331121012002302012032121231302101101220110034232222001100420110010203120100000000000000000111213245
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MNKGLLTLLLLFTCFAHAQVVDTWQFANPQQQQQALNIASQLRCPQCQNQNLLESNAPVAVSMRHQVYSMVAEGKNEVEIIGWMTERYGDFVRYNPPLTGQTLVLWALPVVLLLLMALILWRVRAKR
1	MUSTER	2hl7A	0.439	0.646	2.512	threading_1	---------------GSHMAIDTYEFASDAERERFRNLTQELRCPKCQNQDIADSNAPIAADLRKQIYGQLQQGKSDGEIVDYMVARYGDFVRYKPP------------------------------
2	SPARKS	2kw0a	0.432	0.638	4.091	threading_2	-------------------TIDVLQFKDEAQEQQFRQLTEELRCPKCQNNSIADSNSMIATDLRQKVYELMQEGKSKKEIVDYMVARYGNFVTYDPPLTP---------------------------
3	PROSPECT2	2kw0A	0.432	0.638	1.654	threading_3	-------------------TIDVLQFKDEAQEQQFRQLTEELRCPKCQNNSIADSNSMIATDLRQKVYELMQEGKSKKEIVDYMVARYGNFVTYDPPLTP---------------------------
4	PPA-I	2kw0A	0.432	0.638	3.455	threading_4	-------------------TIDVLQFKDEAQEQQFRQLTEELRCPKCQNNSIADSNSMIATDLRQKVYELMQEGKSKKEIVDYMVARYGNFVTYDPPLTP---------------------------
5	HHPRED-l	2hl7_A	0.439	0.646	6.153	threading_5	---------------GSHMAIDTYEFASDAERERFRNLTQELRCPKCQNQDIADSNAPIAADLRKQIYGQLQQGKSDGEIVDYMVARYGDFVRYKPP------------------------------
6	HHPRED-g	2hl7_A	0.439	0.646	6.291	threading_6	---------------GSHMAIDTYEFASDAERERFRNLTQELRCPKCQNQDIADSNAPIAADLRKQIYGQLQQGKSDGEIVDYMVARYGDFVRYKPP------------------------------
7	SP3	2kw0a	0.432	0.638	3.818	threading_7	-------------------TIDVLQFKDEAQEQQFRQLTEELRCPKCQNNSIADSNSMIATDLRQKVYELMQEGKSKKEIVDYMVARYGNFVTYDPPLTP---------------------------
8	SAM-T99	2hl7A	0.439	0.646	5.762	threading_8	---------------GSHMAIDTYEFASDAERERFRNLTQELRCPKCQNQDIADSNAPIAADLRKQIYGQLQQGKSDGEIVDYMVARYGDFVRYKPP------------------------------
9	MUSTER	2kw0A	0.432	0.638	2.489	threading_9	-------------------TIDVLQFKDEAQEQQFRQLTEELRCPKCQNNSIADSNSMIATDLRQKVYELMQEGKSKKEIVDYMVARYGNFVTYDPPLTP---------------------------
10	SPARKS	2hl7a	0.439	0.646	4.036	threading_10	---------------GSHMAIDTYEFASDAERERFRNLTQELRCPKCQNQDIADSNAPIAADLRKQIYGQLQQGKSDGEIVDYMVARYGDFVRYKPP------------------------------

Predicted Tertiary Structure


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TM-score=0.496 to 1xb2B SCOP code=a.5.2.2	TM-score=0.449 to 1dubA SCOP code=c.14.1.3	TM-score=0.452 to 2aplA SCOP code=a.258.1.1	TM-score=0.452 to 2aplA SCOP code=a.258.1.1	TM-score=0.452 to 2aplA SCOP code=a.258.1.1