Template-based Modeling Results for NIFU_ECOLI

Submitted Primary Sequence

>Length 128
MAYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPPVKIHCSILAEDAIKAAIADYKSKREAK
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MAYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPPVKIHCSILAEDAIKAAIADYKSKREAK
CCHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEEEECCCCEEEEEEEEEECCHHHHHHHHHHHHHHCCCCHHHHHHHCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MAYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPPVKIHCSILAEDAIKAAIADYKSKREAK
42011101210301311021323232000011201300110201010344110100201020100000001000110312223202202122013313212210100000020012002213343444
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MAYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPPVKIHCSILAEDAIKAAIADYKSKREAK
1	MUSTER	1q48A	0.844	1.000	4.334	threading_1	MAYSEKVIDHYENPRNVGSLDKKDSNVGTGMVGAPACGDVMQLQIKVDDNGIIEDAKFKTYGCGSAIASSSLITEWVKGKSLEEAGAIKNSQIAEELELPPVKVHCSILAEDAIKAAIADYKAKQGLE
2	SPARKS	1q48a	0.844	1.000	4.849	threading_2	MAYSEKVIDHYENPRNVGSLDKKDSNVGTGMVGAPACGDVMQLQIKVDDNGIIEDAKFKTYGCGSAIASSSLITEWVKGKSLEEAGAIKNSQIAEELELPPVKVHCSILAEDAIKAAIADYKAKQGLE
3	PROSPECT2	1wfzA	0.718	0.969	2.711	threading_3	----GSSGSSGENPRNVGSLDKTSKNVGTGLVGAPACGDVMKLQIQVDEKGKIVDARFKTFGCGSAIASSSLATEWVKGKTVEEALTIKNTDIAKELCLPPVKLHCSMLAEDAIKAALADYKLKQESK
4	PPA-I	1q48A	0.844	1.000	4.905	threading_4	MAYSEKVIDHYENPRNVGSLDKKDSNVGTGMVGAPACGDVMQLQIKVDDNGIIEDAKFKTYGCGSAIASSSLITEWVKGKSLEEAGAIKNSQIAEELELPPVKVHCSILAEDAIKAAIADYKAKQGLE
5	HHPRED-l	3lvl_A	1.000	0.977	5.596	threading_5	-AYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPPVKIHCSILAEDAIKAAIADYKSKRE--
6	HHPRED-g	2z7e_A	0.520	0.977	4.884	threading_6	FEYNEKVLDHFLNPRNVGVLEDAN---GVGQCGNPACGAAMLFTIKVNENDVIEDVRFKTFGCGSAIAVSSMLTEMVKGKPIQYALNLTYKDIFEELGLPPQKIHCTNLGLETLHVAIKDYLMKQGRV
7	SP3	1q48a	0.844	1.000	4.715	threading_7	MAYSEKVIDHYENPRNVGSLDKKDSNVGTGMVGAPACGDVMQLQIKVDDNGIIEDAKFKTYGCGSAIASSSLITEWVKGKSLEEAGAIKNSQIAEELELPPVKVHCSILAEDAIKAAIADYKAKQGLE
8	SAM-T99	1q48A	0.844	1.000	5.183	threading_8	MAYSEKVIDHYENPRNVGSLDKKDSNVGTGMVGAPACGDVMQLQIKVDDNGIIEDAKFKTYGCGSAIASSSLITEWVKGKSLEEAGAIKNSQIAEELELPPVKVHCSILAEDAIKAAIADYKAKQGLE
9	MUSTER	1wfzA	0.718	0.969	4.155	threading_9	----GSSGSSGENPRNVGSLDKTSKNVGTGLVGAPACGDVMKLQIQVDEKGKIVDARFKTFGCGSAIASSSLATEWVKGKTVEEALTIKNTDIAKELCLPPVKLHCSMLAEDAIKAALADYKLKQESK
10	SPARKS	2z7ea	0.520	0.977	4.457	threading_10	FEYNEKVLDHFLNPRNVGVLEDAN---GVGQCGNPACGAAMLFTIKVNENDVIEDVRFKTFGCGSAIAVSSMLTEMVKGKPIQYALNLTYKDIFEELGLPPQKIHCTNLGLETLHVAIKDYLMKQGRV

Predicted Tertiary Structure


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TM-score=0.932 to 1q48A SCOP code=d.224.1.2	TM-score=0.421 to 1uiyA SCOP code=c.14.1.3	TM-score=0.933 to 1q48A SCOP code=d.224.1.2	TM-score=0.960 to 1wfzA SCOP code=d.224.1.2	TM-score=0.932 to 1q48A SCOP code=d.224.1.2