Template-based Modeling Results for IHFB_ECOLI

Submitted Primary Sequence

>Length 94
MTKSELIERLATQQSHIPAKTVEDAVKEMLEHMASTLAQGERIEIRGFGSFSLHYRAPRTGRNPKTGDKVELEGKYVPHFKPGKELRDRANIYG
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--------10--------20--------30--------40--------50--------60--------70--------80--------90

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MTKSELIERLATQQSHIPAKTVEDAVKEMLEHMASTLAQGERIEIRGFGSFSLHYRAPRTGRNPKTGDKVELEGKYVPHFKPGKELRDRANIYG
CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MTKSELIERLATQQSHIPAKTVEDAVKEMLEHMASTLAQGERIEIRGFGSFSLHYRAPRTGRNPKTGDKVELEGKYVPHFKPGKELRDRANIYG
4412201320033234011310320041002101200342320101000001022323231211421120202033013121033023203334
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--------10--------20--------30--------40--------50--------60--------70--------80--------90

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MTKSELIERLATQQSHIPAKTVEDAVKEMLEHMASTLAQGERIEIRGFGSFSLHYRAPRTGRNPKTGDKVELEGKYVPHFKPGKELRDRANIYG
1	MUSTER	1p71A	0.323	0.989	4.152	threading_1	MNKGELVDAVAEK-ASVTKKQADAVLTAALETIIEAVSSGDKVTLVGFGSFESRERKAREGRNPKTNEKMEIPATRVPAFSAGKLFREKVAPPK
2	SPARKS	1ihfb	1.000	1.000	3.902	threading_2	MTKSELIERLATQQSHIPAKTVEDAVKEMLEHMASTLAQGERIEIRGFGSFSLHYRAPRTGRNPKTGDKVELEGKYVPHFKPGKELRDRANIYG
3	PROSPECT2	1ihfb	1.000	1.000	2.098	threading_3	MTKSELIERLATQQSHIPAKTVEDAVKEMLEHMASTLAQGERIEIRGFGSFSLHYRAPRTGRNPKTGDKVELEGKYVPHFKPGKELRDRANIYG
4	PPA-I	1p71A	0.323	0.989	5.413	threading_4	MNKGELVDAVAEK-ASVTKKQADAVLTAALETIIEAVSSGDKVTLVGFGSFESRERKAREGRNPKTNEKMEIPATRVPAFSAGKLFREKVAPPK
5	HHPRED-l	1owf_B	0.989	0.989	4.075	threading_5	MTKSELIERLATQQSHIPAKTVEDAVKEMLEHMASTLAQGERIAIRGFGSFSLHYRAPRTGRNPKTGDKVELEGKYVPHFKPGKELRDRANIY-
6	HHPRED-g	1owf_B	0.989	1.000	3.115	threading_6	MTKSELIERLATQQSHIPAKTVEDAVKEMLEHMASTLAQGERIAIRGFGSFSLHYRAPRTGRNPKTGDKVELEGKYVPHFKPGKELRDRANIYG
7	SP3	1ihfb	1.000	1.000	3.710	threading_7	MTKSELIERLATQQSHIPAKTVEDAVKEMLEHMASTLAQGERIEIRGFGSFSLHYRAPRTGRNPKTGDKVELEGKYVPHFKPGKELRDRANIYG
8	SAM-T99	1hueA	0.378	0.957	4.128	threading_8	MNKTELINAVAETSG-LSKKDATKAVDAVFDSITEALRKGDKVQLIGFGNFEVRERAARKGRNPQTGEEMEIPASKVPAFKPGKALKDAVK---
9	MUSTER	1hueA	0.389	0.957	3.987	threading_9	MNKTELINAVAET-SGLSKKDATKAVDAVFDSITEALRKGDKVQLIGFGNFEVRERAARKGRNPQTGEEMEIPASKVPAFKPGKALKDAVK---
10	SPARKS	3c4ia	0.301	0.989	3.628	threading_10	MNKAELIDVLTQK-LGSDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQRRRAARVARNPRTGETVKVKPTSVPAFRPGAQFKAVVSGAQ

Predicted Tertiary Structure


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TM-score=0.740 to 1p71A TM-score=0.674 to native SCOP code=a.55.1.1	TM-score=0.740 to 1p71A TM-score=0.674 to native SCOP code=a.55.1.1	TM-score=0.673 to 2o97B TM-score=0.715 to native SCOP code=a.55.1.1	TM-score=0.673 to 2o97B TM-score=0.715 to native SCOP code=a.55.1.1	TM-score=0.740 to 1p71A TM-score=0.674 to native SCOP code=a.55.1.1

Experimental Structure

Download 1ihfB

SCOP code=a.55.1.1