Template-based Modeling Results for GLNK_ECOLI

Submitted Primary Sequence

>Length 112
MKLVTVIIKPFKLEDVREALSSIGIQGLTVTEVKGFGRQKGHAELYRGAEYSVNFLPKVKIDVAIADDQLDEVIDIVSKAAYTGKIGDGKIFVAELQRVIRIRTGEADEAAL
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKLVTVIIKPFKLEDVREALSSIGIQGLTVTEVKGFGRQKGHAELYRGAEYSVNFLPKVKIDVAIADDQLDEVIDIVSKAAYTGKIGDGKIFVAELQRVIRIRTGEADEAAL
CCEEEEEECHHHHHHHHHHHHHCCCCCEEEEEHHHHCCCCCCEEEECCCEEEECCEEEEEEEEEECHHHHHHHHHHHHHHCCCCCCCCCEEEEEEHHHEEEECCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKLVTVIIKPFKLEDVREALSSIGIQGLTVTEVKGFGRQKGHAELYRGAEYSVNFLPKVKIDVAIADDQLDEVIDIVSKAAYTGKIGDGKIFVAELQRVIRIRTGEADEAAL
4210100012210310130023020300000102101334221101211210131021010100023310220010003002223213010000202100101223233234
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110

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Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MKLVTVIIKPFKLEDVREALSSIGIQGLTVTEVKGFGRQKGHAELYRGAEYSVNFLPKVKIDVAIADDQLDEVIDIVSKAAYTGKIGDGKIFVAELQRVIRIRTGEADEAAL
1	MUSTER	3ncpA	0.429	1.000	4.145	threading_1	MKKIEAIVRAEKFPEVKAALEERGFYGMTVTDVKGRGQQGGMQIQFRGRTMEVTLLPKVKLEIVVKDDAVEEVIGLIVNSAFTGSPGDGKIFIIPVEDVVRIRTGERGDDSL
2	SPARKS	2pii_	0.679	1.000	5.189	threading_2	MKKIDAIIKPFKLDDVREALAEVGITGMTVTEVKGFGRQKGHTELYRGAEYMVDFLPKVKIEIVVPDDIVDTCVDTIIRTAQTGKIGDGKIFVFDVARVIRIRTGEEDDAAI
3	PROSPECT2	3ncpA	0.429	1.000	2.801	threading_3	MKKIEAIVRAEKFPEVKAALEERGFYGMTVTDVKGRGQQGGMQIQFRGRTMEVTLLPKVKLEIVVKDDAVEEVIGLIVNSAFTGSPGDGKIFIIPVEDVVRIRTGERGDDSL
4	PPA-I	3ncpA	0.429	1.000	5.520	threading_4	MKKIEAIVRAEKFPEVKAALEERGFYGMTVTDVKGRGQQGGMQIQFRGRTMEVTLLPKVKLEIVVKDDAVEEVIGLIVNSAFTGSPGDGKIFIIPVEDVVRIRTGERGDDSL
5	HHPRED-l	1hwu_A	0.643	0.875	4.123	threading_5	MKQVTAIIKPFKLDEVRESLAEVGVTGLTVTEVKGFG-------------YVVDFLPKVKIEVVVDDKVVEQAVDAIIKAARTGKIGDGKIFVQEVEQVIRIRTGETGPDA-
6	HHPRED-g	2eg2_A	0.568	0.848	3.454	threading_6	MKKIEAIIKPFKLDEVKDALVEIGIGGMTVTEVKGF-----------------DFLPKVKIEVVVRDEDVEKVVETIVKTAQTGRVGDGKIFIIPVEDVIRIRTGERGEQAI
7	SP3	2pii_	0.679	1.000	5.070	threading_7	MKKIDAIIKPFKLDDVREALAEVGITGMTVTEVKGFGRQKGHTELYRGAEYMVDFLPKVKIEIVVPDDIVDTCVDTIIRTAQTGKIGDGKIFVFDVARVIRIRTGEEDDAAI
8	SAM-T99	1pilA	0.679	1.000	4.876	threading_8	MKKIDAIIKPFKLDDVREALAEVGITGMTVTEVKGFGRQKGHTELYRGAEYMVDFLPKVKIEIVVPDDIVDTCVDTIIRTAQTGKIGDGKIFVFDVARVIRIRTGEEDDAAI
9	MUSTER	2ns1B	0.991	1.000	3.784	threading_9	MKLVTVIIKPFKLEDVREALSSIGIQGLTVTEVKGFGRQKGHAELYRGAEFSVNFLPKVKIDVAIADDQLDEVIDIVSKAAYTGKIGDGKIFVAELQRVIRIRTGEADEAAL
10	SPARKS	3m05a	0.226	0.750	0.980	threading_10	TKLVIAIVQDKDANYLSDQFIDQNVR-ATKLSTTGGFLQSGNTTFI-GIE----------------EERVPEVLEIIKKASHTRQVGGATVLVLPVDQFERF----------

Predicted Tertiary Structure


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TM-score=0.845 to 1qy7A TM-score=0.851 to native SCOP code=d.58.5.1	TM-score=0.845 to 1qy7A TM-score=0.851 to native SCOP code=d.58.5.1	TM-score=0.977 to 1pilA TM-score=0.826 to native SCOP code=d.58.5.1	TM-score=0.845 to 1qy7A TM-score=0.851 to native SCOP code=d.58.5.1	TM-score=0.845 to 1qy7A TM-score=0.851 to native SCOP code=d.58.5.1

Experimental Structure

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SCOP code=d.58.5.1