Template-based Modeling Results for EMRE_ECOLI

Submitted Primary Sequence

>Length 110
MNPYIYLGGAILAEVIGTTLMKFSEGFTRLWPSVGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLSRSTPH
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MNPYIYLGGAILAEVIGTTLMKFSEGFTRLWPSVGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLSRSTPH
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MNPYIYLGGAILAEVIGTTLMKFSEGFTRLWPSVGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLSRSTPH
32000000000001000000010031123100000000000000000010012020000000010001000000000002241201000000000000000211243344
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MNPYIYLGGAILAEVIGTTLMKFSEGFTRLWPSVGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLSRSTPH
1	MUSTER	3b5dA	1.000	0.909	3.000	threading_1	-----YLGGAILAEVIGTTLMKFSEGFTRLWPSVGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS-----
2	SPARKS	1s7ba	1.000	0.964	7.223	threading_2	----IYLGGAILAEVIGTTLMKFSEGFTRLWPSVGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLSRSTPH
3	PROSPECT2	1s7bA	0.991	0.964	1.504	threading_3	I----YLGGAILAEVIGTTLMKFSEGFTRLWPSVGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLSRSTPH
4	PPA-I	3b61A	1.000	0.973	2.904	threading_4	---YIYLGGAILAEVIGTTLMKFSEGFTRLWPSVGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLSRSTPH
5	HHPRED-l	2i68_A	1.000	0.709	8.312	threading_5	---YIYLGGAILAEVIGTTLM------------VGTIICYCASFWLLAQTLA-----IAYAIWSGVGIVLISLLSWGFFG------AIIGMMLICAGVLIINLL------
6	HHPRED-g	2i68_A	1.000	0.709	8.059	threading_6	---YIYLGGAILAEVIGTTLM------------VGTIICYCASFWLLAQTLA-----IAYAIWSGVGIVLISLLSWGFFG------AIIGMMLICAGVLIINLL------
7	SP3	1s7ba	1.000	0.964	4.782	threading_7	----IYLGGAILAEVIGTTLMKFSEGFTRLWPSVGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLSRSTPH
8	SAM-T99	3b61A	1.000	0.973	6.009	threading_8	---YIYLGGAILAEVIGTTLMKFSEGFTRLWPSVGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLSRSTPH
9	MUSTER	3b61A	1.000	0.973	2.810	threading_9	---YIYLGGAILAEVIGTTLMKFSEGFTRLWPSVGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLSRSTPH
10	SPARKS	1zk8a	0.156	0.991	1.009	threading_10	LQDVRKNLGIYGIKKLHNRLEEAAEDKRDIHALGEAYVAFVRKHPGLYEATFLRDEEVRKAGDGIVKLCLQVLQQYGLEGENA-LHATRGFRSICHGFASIEQQGGFGLP

Predicted Tertiary Structure


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TM-score=0.515 to 1xeqA TM-score=0.333 to native SCOP code=a.16.1.1	TM-score=0.330 to 1pm6A TM-score=0.190 to native SCOP code=a.6.1.7	TM-score=0.492 to 1n5uA TM-score=0.391 to native SCOP code=a.126.1.1	TM-score=0.485 to 1n5uA TM-score=0.346 to native SCOP code=a.126.1.1	TM-score=0.535 to 1fewA TM-score=0.946 to native SCOP code=a.7.4.1

Experimental Structure

Download 3b61A

SCOP code=a.7.4.1