Template-based Modeling Results for CLPS_ECOLI

Submitted Primary Sequence

>Length 106
MGKTNDWLDFDQLAEEKVRDALKPPSMYKVILVNDDYTPMEFVIDVLQKFFSYDVERATQLMLAVHYQGKAICGVFTAEVAETKVAMVNKYARENEHPLLCTLEKA
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MGKTNDWLDFDQLAEEKVRDALKPPSMYKVILVNDDYTPMEFVIDVLQKFFSYDVERATQLMLAVHYQGKAICGVFTAEVAETKVAMVNKYARENEHPLLCTLEKA
CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCEEEEEECC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MGKTNDWLDFDQLAEEKVRDALKPPSMYKVILVNDDYTPMEFVIDVLQKFFSYDVERATQLMLAVHYQGKAICGVFTAEVAETKVAMVNKYARENEHPLLCTLEKA
5343332232332233324322332210100001121110200020012003122320130011013302000000112101110210130034151101011135
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MGKTNDWLDFDQLAEEKVRDALKPPSMYKVILVNDDYTPMEFVIDVLQKFFSYDVERATQLMLAVHYQGKAICGVFTAEVAETKVAMVNKYARENEHPLLCTLEKA
1	MUSTER	2wa8C	1.000	0.972	4.380	threading_1	---TNDWLDFDQLAEEKVRDALKPPSMYKVILVNDDYTPMEFVIDVLQKFFSYDVERATQLMLAVHYQGKAICGVFTAEVAETKVAMVNKYARENEHPLLCTLEKA
2	SPARKS	1lzwa	0.989	0.858	4.321	threading_2	---------------EKVRDALKPPSMYKVILVNDDYTPMEFVIDVLQKFFSYDVERATQLMLAVAYQGKAICGVFTAEVAETKVAMVNKYARENEHPLLCTLEKA
3	PROSPECT2	1lzwa	0.989	0.858	1.952	threading_3	---------------EKVRDALKPPSMYKVILVNDDYTPMEFVIDVLQKFFSYDVERATQLMLAVAYQGKAICGVFTAEVAETKVAMVNKYARENEHPLLCTLEKA
4	PPA-I	2wa8C	1.000	0.972	6.641	threading_4	---TNDWLDFDQLAEEKVRDALKPPSMYKVILVNDDYTPMEFVIDVLQKFFSYDVERATQLMLAVHYQGKAICGVFTAEVAETKVAMVNKYARENEHPLLCTLEKA
5	HHPRED-l	2w9r_A	1.000	0.887	6.658	threading_5	-----------QLAEEKVRDALKPPSMYKVILVNDDYTPMEFVIDVLQKFFSYDVERATQLMLAVHYQGKAICGVFTAEVAETKVAMVNKYARENEHPLLCTLEK-
6	HHPRED-g	2w9r_A	1.000	0.896	5.948	threading_6	-----------QLAEEKVRDALKPPSMYKVILVNDDYTPMEFVIDVLQKFFSYDVERATQLMLAVHYQGKAICGVFTAEVAETKVAMVNKYARENEHPLLCTLEKA
7	SP3	1lzwa	0.989	0.858	3.952	threading_7	---------------EKVRDALKPPSMYKVILVNDDYTPMEFVIDVLQKFFSYDVERATQLMLAVAYQGKAICGVFTAEVAETKVAMVNKYARENEHPLLCTLEKA
8	SAM-T99	2wa8C	1.000	0.972	6.314	threading_8	---TNDWLDFDQLAEEKVRDALKPPSMYKVILVNDDYTPMEFVIDVLQKFFSYDVERATQLMLAVHYQGKAICGVFTAEVAETKVAMVNKYARENEHPLLCTLEKA
9	MUSTER	3gq1A	0.565	0.802	3.790	threading_9	---------------------TQKPSLYRVLILNDDYTPMEFVVYVLERFFNKSREDATRIMLHVHQNGVGVCGVYTYEVAETKVAQVIDSARRHQHPLQCTMEKD
10	SPARKS	2lcia	0.137	0.962	0.861	threading_10	QGYQVRDVNDSDELKKEMKKLAEEKNFEKILIISNDKQLLKEMLELISKLQDQDENELEEFKRKIESQGYEVRKVTDDEEALKIVREFMQKAGSLEHHHHHH----

Predicted Tertiary Structure


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TM-score=0.621 to 2zjq5 TM-score=0.859 to native SCOP code=d.45.1.1	TM-score=0.621 to 2zjq5 TM-score=0.859 to native SCOP code=d.45.1.1	TM-score=0.609 to 2zjq5 TM-score=0.809 to native SCOP code=d.45.1.1	TM-score=0.609 to 2zjq5 TM-score=0.809 to native SCOP code=d.45.1.1	TM-score=0.621 to 2zjq5 TM-score=0.859 to native SCOP code=d.45.1.1

Experimental Structure

Download 2wa8C

SCOP code=d.45.1.1