Template-based Modeling Results for CCMD_ECOLI

Submitted Primary Sequence

>Length 69
MTPAFASWNEFFAMGGYAFFVWLAVVMTVIPLVVLVVHSVMQHRAILRGVAQQRAREARLRAAQQQEAA
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--------10--------20--------30--------40--------50--------60

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MTPAFASWNEFFAMGGYAFFVWLAVVMTVIPLVVLVVHSVMQHRAILRGVAQQRAREARLRAAQQQEAA
CCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
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--------10--------20--------30--------40--------50--------60

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MTPAFASWNEFFAMGGYAFFVWLAVVMTVIPLVVLVVHSVMQHRAILRGVAQQRAREARLRAAQQQEAA
541111001200210010000000000000000010011112122103210223233221322433334
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--------10--------20--------30--------40--------50--------60

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MTPAFASWNEFFAMGGYAFFVWLAVVMTVIPLVVLVVHSVMQHRAILRGVAQQRAREARLRAAQQQEAA
1	MUSTER	3cf5V	0.141	0.928	1.028	threading_1	MKP-----SEMRNLQATDFAKEDARKKELMELRFQAAAGQLAQPHRVRQLRREVAQLNTVKAELARKGE
2	PPA-I	1ojhD	0.167	0.783	1.035	threading_2	---------------NQPIELSLEQQFSIRSFATQVQNSHDQAKDFLVKLYEQVVREATYQELLKHQWG
3	PPA-I	2x7aA	0.105	0.826	1.002	threading_3	-----ATCNHTVALA--SLDAEKAQGQKKVEELEGEITTLNHKLQDASAEVERLRRENQVLSVR-----
4	MUSTER	3jsiA2	0.105	0.826	0.945	threading_4	VAPAQIGFIKFVLI-----PMFETVTKLFPMVEEIMLQPLWESRDRYEELKRIDDAMKELQK-------
5	SPARKS	1utg_	0.175	0.913	0.984	threading_5	ICPRFAHVIENLLLGT-----PSSYETSLKEFEDTMKDAGMQMKKVLDSLP-QTTRENIMKLTEKIVKS
6	PROSPECT2	2crbA	0.159	1.000	0.623	threading_6	GSSGSRRADRLLAAGKYEEAISCHRKATTYLSEAMQRDSHMKQLLLIQERWKRAKREERLKAHSGPSSG
7	PPA-I	2kesA	0.128	0.681	0.980	threading_7	----------------------GSVETCMSLASQVVKLTKQLKEQTVERVTLQNQLQQFLEAQKSEGKS
8	HHPRED-l	2raw_B	0.286	0.203	0.720	threading_8	LPKAEMNWLDYFAL-------------------------------------------------------
9	HHPRED-g	3grl_A	0.101	1.000	0.504	threading_9	LSNCPIAVTHFLHNSANVPFLTGQQGLCALLLGISIYFNDYMKEKLKQLIEKRIGKENFLGASQKPQPN
10	SP3	1utg_	0.169	0.942	0.691	threading_10	ICPRFAHVIENLLLGTPSSYETSLK---EFEPDDTMKDAGMQMKKVLDSLP-QTTRENIMKLTEKIVKS

Predicted Tertiary Structure


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TM-score=0.747 to 3cf5V SCOP code=a.2.2.1	TM-score=0.451 to 1q90R SCOP code=f.23.12.1	TM-score=0.719 to 1urqA SCOP code=h.1.15.1	TM-score=0.576 to 1h2sB SCOP code=f.17.4.1	TM-score=0.672 to 1gpjA SCOP code=a.151.1.1