QUARK Ab Initio Results for YTFI_ECOLI

Submitted Primary Sequence

>Length 312
MLPRIRHNNFIGAVELFVKSSYTKTHSNNFFNNIHHAFKKKDWISNYDSLLTLREFFRCATQIDKSGYQVLSSKNETVHAMDKFLISFSLKDNGAEYTMTLRGSGFEYEEIPITINEYNSFMDFKNREFPLEQNRRLYAWDILQKKQSDIPKRIKGYIHQAIGDVSLGYALLEDIVSKLKRGKFELQIPGGGIKECDGWYIYEKIIDDNFAIVIESLGFALKIYGGDERFRNGSSVVLEDEDYSLIYNFLVNAGCQQVELAEQVDAIVSANLAADSDITKEKICEKYKSTIEAFKKEQLALPVLVRRKNSET
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MLPRIRHNNFIGAVELFVKSSYTKTHSNNFFNNIHHAFKKKDWISNYDSLLTLREFFRCATQIDKSGYQVLSSKNETVHAMDKFLISFSLKDNGAEYTMTLRGSGFEYEEIPITINEYNSFMDFKNREFPLEQNRRLYAWDILQKKQSDIPKRIKGYIHQAIGDVSLGYALLEDIVSKLKRGKFELQIPGGGIKECDGWYIYEKIIDDNFAIVIESLGFALKIYGGDERFRNGSSVVLEDEDYSLIYNFLVNAGCQQVELAEQVDAIVSANLAADSDITKEKICEKYKSTIEAFKKEQLALPVLVRRKNSET
CCCCTTTTTTCEEEEEEEECTTTTTTTTTHHHHHHHHHHHTTTTHCHHHHHHHHHHHHHHHHHTTTTHHHHCTTTTHHHHHHHHEEEEETTTTTCEEEEEEETTTTTTTTTTTEHHHHHHHHTTTTTCCCHHHCCCHHHHHHHHHHHTTTTHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEEEETTTTCCTTTTTTEEEEETTTTTEEEEEECCCEEEEEETTTTTTTTTCEEEEECCCHHHHHHHHHHTTTTHHHHHHHHHHHHHCCCCCTTTTTTHHHHHHHHHHHHHHHHHHCCCCEEEETTTTCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310

Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position

Predicted Solvent Accessibility

>0-buried to 9-exposed
MLPRIRHNNFIGAVELFVKSSYTKTHSNNFFNNIHHAFKKKDWISNYDSLLTLREFFRCATQIDKSGYQVLSSKNETVHAMDKFLISFSLKDNGAEYTMTLRGSGFEYEEIPITINEYNSFMDFKNREFPLEQNRRLYAWDILQKKQSDIPKRIKGYIHQAIGDVSLGYALLEDIVSKLKRGKFELQIPGGGIKECDGWYIYEKIIDDNFAIVIESLGFALKIYGGDERFRNGSSVVLEDEDYSLIYNFLVNAGCQQVELAEQVDAIVSANLAADSDITKEKICEKYKSTIEAFKKEQLALPVLVRRKNSET
533423223100001000212223222210111011003432112103100102200200221232112012233310210130000000333211000102122231220201021022112132330213222311012001333230232021001200020200100022002203412010202211043120000012003310000011000002012123414212000012221200010003120210200210110011212132412233003203210310122312010012223345
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310

Download Predicted Solvent Accessibility

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.413 to 1uuzA SCOP code=d.233.1.1	TM-score=0.395 to 1kekA SCOP code=c.36.1.8	TM-score=0.390 to 2r2vA SCOP code=h.1.3.1	TM-score=0.407 to 2i5uA SCOP code=a.275.1.1	TM-score=0.390 to 1r71B SCOP code=a.4.14.1

Estimated TM-score of Model 1: 0.3211 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.3573 ±0.0778