QUARK Ab Initio Results for YKFM_ECOLI

Submitted Primary Sequence

>Length 159
MRLHVKLKEFLSMFFMAILFFPAFNASLFFTGVKPLYSIIKCSTEIFYDWRMLILCFGFMSFSFLNIHVILLTIIKSFLIKKTKVVNFATDITIQLTLIFLLIAIVIAPLIAPFVTGYVNTNYHPCGNNTGIFPGAIYIKNGMKCNNGYISRKEDSAVK
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MRLHVKLKEFLSMFFMAILFFPAFNASLFFTGVKPLYSIIKCSTEIFYDWRMLILCFGFMSFSFLNIHVILLTIIKSFLIKKTKVVNFATDITIQLTLIFLLIAIVIAPLIAPFVTGYVNTNYHPCGNNTGIFPGAIYIKNGMKCNNGYISRKEDSAVK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTTHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHHCTTTTTTTTTTTTCTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150

Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position
Download Distance Profile from Fragments

Predicted Solvent Accessibility

>0-buried to 9-exposed
MRLHVKLKEFLSMFFMAILFFPAFNASLFFTGVKPLYSIIKCSTEIFYDWRMLILCFGFMSFSFLNIHVILLTIIKSFLIKKTKVVNFATDITIQLTLIFLLIAIVIAPLIAPFVTGYVNTNYHPCGNNTGIFPGAIYIKNGMKCNNGYISRKEDSAVK
541201122000000000000000101001120210120020222001001000000000000001000000100210104312101001110011000000000111211121120111221110111200020000022113022121244332224
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150

Download Predicted Solvent Accessibility

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.604 to 1yd8G SCOP code=a.7.8.1	TM-score=0.629 to 1uusA SCOP code=a.47.1.1	TM-score=0.540 to 2h8aA SCOP code=f.56.1.1	TM-score=0.503 to 1a41A SCOP code=d.163.1.2	TM-score=0.461 to 1u6gC SCOP code=a.118.1.2

Estimated TM-score of Model 1: 0.3619 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.4009 ±0.0778