QUARK Ab Initio Results for YGGN_ECOLI

Submitted Primary Sequence

>Length 239
MMRKMLLAAALSVTAMTAHADYQCSVTPRDDVIVSPQTVQVKGENGNLVITPDGNVMYNGKQYSLNAAQREQAKDYQAELRSTLPWIDEGAKSRVEKARIALDKIIVQEMGESSKMRSRLTKLDAQLKEQMNRIIETRSDGLTFHYKAIDQVRAEGQQLVNQAMGGILQDSINEMGAKAVLKSGGNPLQNVLGSLGGLQSSIQTEWKKQEKDFQQFGKDVCSRVVTLEDSRKALVGNLK
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MMRKMLLAAALSVTAMTAHADYQCSVTPRDDVIVSPQTVQVKGENGNLVITPDGNVMYNGKQYSLNAAQREQAKDYQAELRSTLPWIDEGAKSRVEKARIALDKIIVQEMGESSKMRSRLTKLDAQLKEQMNRIIETRSDGLTFHYKAIDQVRAEGQQLVNQAMGGILQDSINEMGAKAVLKSGGNPLQNVLGSLGGLQSSIQTEWKKQEKDFQQFGKDVCSRVVTLEDSRKALVGNLK
CHHHHHHHHHHHHHHHHHHHHHCCCCCTTTTTTETTTTEEEETTTTCEEETTTTCETTTTTEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHHHHHCEEEEECCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230

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Download Distance Profile from Fragments

Predicted Solvent Accessibility

>0-buried to 9-exposed
MMRKMLLAAALSVTAMTAHADYQCSVTPRDDVIVSPQTVQVKGENGNLVITPDGNVMYNGKQYSLNAAQREQAKDYQAELRSTLPWIDEGAKSRVEKARIALDKIIVQEMGESSKMRSRLTKLDAQLKEQMNRIIETRSDGLTFHYKAIDQVRAEGQQLVNQAMGGILQDSINEMGAKAVLKSGGNPLQNVLGSLGGLQSSIQTEWKKQEKDFQQFGKDVCSRVVTLEDSRKALVGNLK
42211110000000010021122021214310101121010212322110123110002222020322122103201230230012023003210320220012001322132230221023012202232220011232121121201220312023102200110012001210021034222210220121022012102221342342023104200320220231232123315
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230

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Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.569 to 2tmaA SCOP code=h.1.5.1	TM-score=0.530 to 1kilE SCOP code=h.1.15.1	TM-score=0.517 to 1gk7A SCOP code=h.1.20.1	TM-score=0.512 to 1iseA SCOP code=d.67.3.1	TM-score=0.530 to 1c17L SCOP code=f.17.1.1

Estimated TM-score of Model 1: 0.4228 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.4661 ±0.0778