QUARK Ab Initio Results for YFIP_ECOLI

Submitted Primary Sequence

>Length 232
MTENAVLQLRAERIARATRPFLARGNRVRRCQRCLLPEKLCLCSTITPAQAKSRFCLLMFDTEPMKPSNTGRLIADILPDTVAFQWSRTEPSQDLLELVQNPDYQPMVVFPASYADEQREVIFTPPAGKPPLFIMLDGTWPEARKMFRKSPYLDNLPVISVDLSRLSAYRLREAQAEGQYCTAEVAIALLDMAGDTGAAAGLGEHFTRFKTRYLAGKTQHLGSITAEQLESV
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MTENAVLQLRAERIARATRPFLARGNRVRRCQRCLLPEKLCLCSTITPAQAKSRFCLLMFDTEPMKPSNTGRLIADILPDTVAFQWSRTEPSQDLLELVQNPDYQPMVVFPASYADEQREVIFTPPAGKPPLFIMLDGTWPEARKMFRKSPYLDNLPVISVDLSRLSAYRLREAQAEGQYCTAEVAIALLDMAGDTGAAAGLGEHFTRFKTRYLAGKTQHLGSITAEQLESV
CCHHHHHHHHHHHHHHHCTTTTTTTTTTTCTTTTTCCCCCTTTTTTCCCCCCCEEEETTTTHHHCTTTTHHHHHHHHTTTTTEEEETTTTTTTHHHHHHHTTTTCEEEEEETTTTTTHHHCCCCCTTTTCEEEEEECCCHHHHHHHHHHCHHHHCCCEEECCCCCTTTTTETTTTTTTTTTHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCTTTTTTTCCHHHHHHC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230

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Download Predicted Starting Beta-turn Position
Download Distance Profile from Fragments

Predicted Solvent Accessibility

>0-buried to 9-exposed
MTENAVLQLRAERIARATRPFLARGNRVRRCQRCLLPEKLCLCSTITPAQAKSRFCLLMFDTEPMKPSNTGRLIADILPDTVAFQWSRTEPSQDLLELVQNPDYQPMVVFPASYADEQREVIFTPPAGKPPLFIMLDGTWPEARKMFRKSPYLDNLPVISVDLSRLSAYRLREAQAEGQYCTAEVAIALLDMAGDTGAAAGLGEHFTRFKTRYLAGKTQHLGSITAEQLESV
4532011212221113232222141341230230210331010110230413010000102222133211020002003301001112232233002203123220000001222332330122232232100000100022013003202102402100042242010101223232110000000100220222200200020021002101122232212222322334
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230

Download Predicted Solvent Accessibility

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.408 to 1dd4A SCOP code=a.108.1.1	TM-score=0.397 to 2r2vA SCOP code=h.1.3.1	TM-score=0.422 to 1nt2B SCOP code=a.183.1.1	TM-score=0.419 to 1pixA SCOP code=c.14.1.4	TM-score=0.468 to 1z0kB SCOP code=a.2.19.1

Estimated TM-score of Model 1: 0.3112 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.3466 ±0.0778