QUARK Ab Initio Results for YFFP_ECOLI

Submitted Primary Sequence

>Length 197
MSLIRTETRDTKRAADPLHDLRSKPFSEWGEDEIRRFNLIDALLEFVYTDTSSPFGIGMTFDYTECWEIGVRDDCLVMTRVKPVHPEYAKHWNMKGVMNDKTRFHADKWVGYSKVLAWVSLSHKDTFTGAKRFQYFQTMYDMERQINANLPVGGLPNVDTERTGKLFQRDDFSEDSHANDPKLVGDDYVPQAPEQIN
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MSLIRTETRDTKRAADPLHDLRSKPFSEWGEDEIRRFNLIDALLEFVYTDTSSPFGIGMTFDYTECWEIGVRDDCLVMTRVKPVHPEYAKHWNMKGVMNDKTRFHADKWVGYSKVLAWVSLSHKDTFTGAKRFQYFQTMYDMERQINANLPVGGLPNVDTERTGKLFQRDDFSEDSHANDPKLVGDDYVPQAPEQIN
CCCCCTTTTCHHHHHCCHHHHHCCCCTTTTHHHHHHHHHHHHHHHHHTTTTTCCHHHHHHHTTTTTEEEETTTTTEEEEETTTTCHHHHTTTTCCETTTTHHHHHHHHHHCCEEEEEEEECCTTTTTTTHHHHHHHHHHHHHHHHHCCCCTTTTCCCCCHHHHHHHHCTTTTTCTTTTTTTTTTTTTTCCCCHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190

Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position
Download Distance Profile from Fragments

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSLIRTETRDTKRAADPLHDLRSKPFSEWGEDEIRRFNLIDALLEFVYTDTSSPFGIGMTFDYTECWEIGVRDDCLVMTRVKPVHPEYAKHWNMKGVMNDKTRFHADKWVGYSKVLAWVSLSHKDTFTGAKRFQYFQTMYDMERQINANLPVGGLPNVDTERTGKLFQRDDFSEDSHANDPKLVGDDYVPQAPEQIN
54222232332321212122033231232133102102001000200223221210001001213001000112000011031112300411212000113121001200100100000102133212011101002001201230233011110210102200201423312321223223101332122123314
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190

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Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.433 to 1f5qD SCOP code=a.74.1.1	TM-score=0.413 to 2aplA SCOP code=a.258.1.1	TM-score=0.427 to 1cpqA SCOP code=a.24.3.2	TM-score=0.416 to 2ozgA SCOP code=d.106.1.4	TM-score=0.400 to 2hs5A SCOP code=a.4.5.6

Estimated TM-score of Model 1: 0.2821 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.3155 ±0.0778