QUARK Ab Initio Results for YDJY_ECOLI

Submitted Primary Sequence

>Length 225
MLQHYSVSWKKGLAALCLLAVAGLSGCDQQENAAAKVEYDGLSNSQPLRVDANNHTVTMLVQINGRFLTDDTRHGIVFKDGSNGHKSLFMGYATPKAFYEALKEAGGTPGENMTMDNKETTHVTGSKLDISVNWQGAAKAYSFDEVIVDSNGKKLDMRFGGNLTAAEEKKTGCLVCLDSCPVGIVSNATYTYGAVEKRGEVKFKGNASVLPADNTLATVTFKIAE
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MLQHYSVSWKKGLAALCLLAVAGLSGCDQQENAAAKVEYDGLSNSQPLRVDANNHTVTMLVQINGRFLTDDTRHGIVFKDGSNGHKSLFMGYATPKAFYEALKEAGGTPGENMTMDNKETTHVTGSKLDISVNWQGAAKAYSFDEVIVDSNGKKLDMRFGGNLTAAEEKKTGCLVCLDSCPVGIVSNATYTYGAVEKRGEVKFKGNASVLPADNTLATVTFKIAE
CTTTTEEEHHHHHHHHHHHHHHHHCTTTTTTHHHHHHHHCCCTTTTCEEETTTTTEEEEEETTTTTTTTTTTTEEEETTTTTTTCEEEEEECCCHHHHHHHHHHHCCTTTTCCTTTTTTTEETTTTTEEEEETTTTTTTTTTCCEEEETTTTTEEEEETTTTHHHHHHCCCCCEEETTTTTTCCECCCCTTTTTETTTTTEEEECCCTTTTTTTCEEEEEEEECC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220

Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position
Download Distance Profile from Fragments

Predicted Solvent Accessibility

>0-buried to 9-exposed
MLQHYSVSWKKGLAALCLLAVAGLSGCDQQENAAAKVEYDGLSNSQPLRVDANNHTVTMLVQINGRFLTDDTRHGIVFKDGSNGHKSLFMGYATPKAFYEALKEAGGTPGENMTMDNKETTHVTGSKLDISVNWQGAAKAYSFDEVIVDSNGKKLDMRFGGNLTAAEEKKTGCLVCLDSCPVGIVSNATYTYGAVEKRGEVKFKGNASVLPADNTLATVTFKIAE
555200020220000000000000121333322202231322233220201133220100010112112331110000231321210000010213100200220002113212123332210311201010103212321211100111422200010001020033342100000110211011212122011122120202032321134312000101135
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220

Download Predicted Solvent Accessibility

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.393 to 1dlpC SCOP code=b.78.1.1	TM-score=0.373 to 1lvoD SCOP code=b.47.1.4	TM-score=0.382 to 1nrjA SCOP code=d.110.4.4	TM-score=0.370 to 1gwcC SCOP code=a.45.1.1	TM-score=0.399 to 2r2vA SCOP code=h.1.3.1

Estimated TM-score of Model 1: 0.2881 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.3220 ±0.0778