QUARK Ab Initio Results for YBJN_ECOLI

Submitted Primary Sequence

>Length 158
MTSLVVPGLDTLRQWLDDLGMSFFECDNCQALHLPHMQNFDGVFDAKIDLIDNTILFSAMAEVRPSAVLPLAADLSAINASSLTVKAFLDMQDDNLPKLVVCQSLSVMQGVTYEQFAWFVRQSEEQISMVILEANAHQLLLPTDDEGQNNVTENYFLH
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MTSLVVPGLDTLRQWLDDLGMSFFECDNCQALHLPHMQNFDGVFDAKIDLIDNTILFSAMAEVRPSAVLPLAADLSAINASSLTVKAFLDMQDDNLPKLVVCQSLSVMQGVTYEQFAWFVRQSEEQISMVILEANAHQLLLPTDDEGQNNVTENYFLH
CCTTTTCCHHHHHHHHHHCCCCEEETTTTTHHCCHHTTTTTTTEEEEEETTTTTHHHHHHHHHCHHHHHHHHHHHHHHHCCHHHHHHHHHHHTTTTTEEEEECCHHHHTTTTHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150

Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position
Download Distance Profile from Fragments

Predicted Solvent Accessibility

>0-buried to 9-exposed
MTSLVVPGLDTLRQWLDDLGMSFFECDNCQALHLPHMQNFDGVFDAKIDLIDNTILFSAMAEVRPSAVLPLAADLSAINASSLTVKAFLDMQDDNLPKLVVCQSLSVMQGVTYEQFAWFVRQSEEQISMVILEANAHQLLLPTDDEGQNNVTENYFLH
55221121131023003311010010220110101312313000101000222000000102021100010001003011211001000202243011000010010132021310120032023101200110131200012333233322332224
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150

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Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.439 to 1fbvA SCOP code=a.39.1.7	TM-score=0.456 to 1u6gC SCOP code=a.118.1.2	TM-score=0.436 to 1tuaA SCOP code=d.51.1.1	TM-score=0.431 to 7r1rA SCOP code=a.98.1.1	TM-score=0.436 to 2hyeC SCOP code=a.4.5.34

Estimated TM-score of Model 1: 0.2926 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.3267 ±0.0778