QUARK Ab Initio Results for YBGA_ECOLI

Submitted Primary Sequence

>Length 169
MNLQRFDDSTLIRIFALHELHRLKEHGLTRGALLDYHSRYKLVFLAHSQPEYRKLGPFVADIHQWQNLDDYYNQYRQRVVVLLSHPANPRDHTNVLMHVQGYFRPHIDSTERQQLAALIDSYRRGEQPLLAPLMRIKHYMALYPDAWLSGQRYFELWPRVINLRHSGVL
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MNLQRFDDSTLIRIFALHELHRLKEHGLTRGALLDYHSRYKLVFLAHSQPEYRKLGPFVADIHQWQNLDDYYNQYRQRVVVLLSHPANPRDHTNVLMHVQGYFRPHIDSTERQQLAALIDSYRRGEQPLLAPLMRIKHYMALYPDAWLSGQRYFELWPRVINLRHSGVL
TTTTHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCTTTTCHHHHHHHHHHHHHHHHCCCCTTTTHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCTTTTHHHHHHHHHHHHHHTTTTHHHHCCTTTTTTTHHCTTTTCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160

Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position
Download Distance Profile from Fragments

Predicted Solvent Accessibility

>0-buried to 9-exposed
MNLQRFDDSTLIRIFALHELHRLKEHGLTRGALLDYHSRYKLVFLAHSQPEYRKLGPFVADIHQWQNLDDYYNQYRQRVVVLLSHPANPRDHTNVLMHVQGYFRPHIDSTERQQLAALIDSYRRGEQPLLAPLMRIKHYMALYPDAWLSGQRYFELWPRVINLRHSGVL
5433310210011000021012024322221101200110100010202200220010013033233132002101210120122313233000001100010243033211310120021134231112000110210022121110111211220132121232224
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160

Download Predicted Solvent Accessibility

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.492 to 3e9pA SCOP code=c.55.3.14	TM-score=0.480 to 1tycA SCOP code=c.26.1.1	TM-score=0.508 to 1hrbA SCOP code=a.24.4.1	TM-score=0.465 to 1fc3A SCOP code=a.4.6.3	TM-score=0.493 to 1hrbA SCOP code=a.24.4.1

Estimated TM-score of Model 1: 0.3980 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.4395 ±0.0778