QUARK Ab Initio Results for YBFL_ECOLI

Submitted Primary Sequence

>Length 378
MELKKLMEHISIIPDYRQAWKVEHKLSGILLLTIFAVISGAESWEDIEDFGETHLDFLKQYGDFENGIPVHDTIARVVSCISPAKFHECFINWMRDCHSSNDKDVIAIDGKTLRHSYDKSRRRGAIHVISAFSTMHSLVIGQIKTDKKSNEITAIPELLNMLDIKGKIITTDAMGCQKDIAEKIQKQGGDYLFAVKGNQGRLNKAFEEKFPLKELNNPEHDSYAMSEKSHGREEIRLHIVCDVPDELIDFTFEWKGLKKLCVAVSFRSIIAEQKKEPEMTVRYYISSADLTAEKFATAIRNHWHVENKLHWRLDVVMNEDDCKIRRGNAAELFSGIRHIAINILTNDKVFKAGLRRKMRKAAMDRNYLASVLAGSGLS
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MELKKLMEHISIIPDYRQAWKVEHKLSGILLLTIFAVISGAESWEDIEDFGETHLDFLKQYGDFENGIPVHDTIARVVSCISPAKFHECFINWMRDCHSSNDKDVIAIDGKTLRHSYDKSRRRGAIHVISAFSTMHSLVIGQIKTDKKSNEITAIPELLNMLDIKGKIITTDAMGCQKDIAEKIQKQGGDYLFAVKGNQGRLNKAFEEKFPLKELNNPEHDSYAMSEKSHGREEIRLHIVCDVPDELIDFTFEWKGLKKLCVAVSFRSIIAEQKKEPEMTVRYYISSADLTAEKFATAIRNHWHVENKLHWRLDVVMNEDDCKIRRGNAAELFSGIRHIAINILTNDKVFKAGLRRKMRKAAMDRNYLASVLAGSGLS
CCCHHHHHHHHCCCCTTTTTTTETTTTHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHTTTTTTTTTTCCHHHHHHHHHHCCHHHHHHHHHHHHHHHTTTTTTTTEEEECHHHCCTTTTTTTTTTTTTEEEETTTTTCEEEEEETTTTTCHHHHHHHHHHCCTTTTTEETTTTTEEECHHHHHHHHCCCCEEEETTTTTHHHHHHHHHHHHHHHCTTTTCCCEEEETTTTTTTEEEEEEEETTTTTTTTCCCTTTTCEEEEEEEEEEEEEETTTTTTTEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCTTTTTTCCTTTTTTTTCHHHHHHHHHHHHHHHHHHHHTTTTCCCHHHHHHHHCCCHHHHHHHHHHCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370

Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position

Predicted Solvent Accessibility

>0-buried to 9-exposed
MELKKLMEHISIIPDYRQAWKVEHKLSGILLLTIFAVISGAESWEDIEDFGETHLDFLKQYGDFENGIPVHDTIARVVSCISPAKFHECFINWMRDCHSSNDKDVIAIDGKTLRHSYDKSRRRGAIHVISAFSTMHSLVIGQIKTDKKSNEITAIPELLNMLDIKGKIITTDAMGCQKDIAEKIQKQGGDYLFAVKGNQGRLNKAFEEKFPLKELNNPEHDSYAMSEKSHGREEIRLHIVCDVPDELIDFTFEWKGLKKLCVAVSFRSIIAEQKKEPEMTVRYYISSADLTAEKFATAIRNHWHVENKLHWRLDVVMNEDDCKIRRGNAAELFSGIRHIAINILTNDKVFKAGLRRKMRKAAMDRNYLASVLAGSGLS
551330121022031233223120200000000000000103103101100200120022103132100112000200120122202200120021021133320000103202211332444220000000012210000002034422111000200220213120000100001230022013220100000221123003001210113323333232111224241221000000021233113121312112100000001011134443221102000011322032002001200101140112221102222041231101200000020001002323224221211022011133000100321224
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370

Download Predicted Solvent Accessibility

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.377 to 1ov9B SCOP code=a.155.1.1	TM-score=0.381 to 1pd3A SCOP code=a.30.3.1	TM-score=0.390 to 1r71B SCOP code=a.4.14.1	TM-score=0.391 to 1et1A SCOP code=j.15.1.1	TM-score=0.399 to 3bzkA SCOP code=a.60.2.6

Estimated TM-score of Model 1: 0.3614 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.4004 ±0.0778