QUARK Ab Initio Results for YBAP_ECOLI

Submitted Primary Sequence

>Length 264
MDLLYRVKTLWAALRGNHYTWPAIDITLPGNRHFHLIGSIHMGSHDMAPLPTRLLKKLKNADALIVEADVSTSDTPFANLPACEALEERISEEQLQNLQHISQEMGISPSLFSTQPLWQIAMVLQATQAQKLGLRAEYGIDYQLLQAAKQQHKPVIELEGAENQIAMLLQLPDKGLALLDDTLTHWHTNARLLQQMMSWWLNAPPQNNDITLPNTFSQSLYDVLMHQRNLAWRDKLRAMPPGRYVVAVGALHLYGEGNLPQMLR
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MDLLYRVKTLWAALRGNHYTWPAIDITLPGNRHFHLIGSIHMGSHDMAPLPTRLLKKLKNADALIVEADVSTSDTPFANLPACEALEERISEEQLQNLQHISQEMGISPSLFSTQPLWQIAMVLQATQAQKLGLRAEYGIDYQLLQAAKQQHKPVIELEGAENQIAMLLQLPDKGLALLDDTLTHWHTNARLLQQMMSWWLNAPPQNNDITLPNTFSQSLYDVLMHQRNLAWRDKLRAMPPGRYVVAVGALHLYGEGNLPQMLR
HHHHHHHHHHHHHHCCTTTTCTTTTEETTTTCEEEEEEEEECCTTTTTTTCHHHHHHHHHTTTTEEEECTTTTTTHHHHTTTTCCHHHHCCHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHCTTTTTTTTHHHHHHHHHHCCCCEEEECCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTEEEEETTTTTTTTTTHHHHHH
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260

Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position
Download Distance Profile from Fragments

Predicted Solvent Accessibility

>0-buried to 9-exposed
MDLLYRVKTLWAALRGNHYTWPAIDITLPGNRHFHLIGSIHMGSHDMAPLPTRLLKKLKNADALIVEADVSTSDTPFANLPACEALEERISEEQLQNLQHISQEMGISPSLFSTQPLWQIAMVLQATQAQKLGLRAEYGIDYQLLQAAKQQHKPVIELEGAENQIAMLLQLPDKGLALLDDTLTHWHTNARLLQQMMSWWLNAPPQNNDITLPNTFSQSLYDVLMHQRNLAWRDKLRAMPPGRYVVAVGALHLYGEGNLPQMLR
431011011000002122112100000133321000000000014311201230131043020000101212231211113223103330233102102300431201121022111100000010010232214132001110120034341201102203100200240233012101200220321130022001111222131012101220031012100220011003103412412000000000021322112114
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260

Download Predicted Solvent Accessibility

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.479 to 1pv3A SCOP code=a.24.14.1	TM-score=0.510 to 1et1A SCOP code=j.15.1.1	TM-score=0.497 to 1lrzA SCOP code=a.2.7.4	TM-score=0.488 to 1gk7A SCOP code=h.1.20.1	TM-score=0.452 to 1kd9A SCOP code=h.1.3.1

Estimated TM-score of Model 1: 0.3715 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.4111 ±0.0778