QUARK Ab Initio Results for TTDA_ECOLI

Submitted Primary Sequence

>Length 303
MMSESNKQQAVNKLTEIVANFTAMISTRMPDDVVDKLKQLKDAETSSMGKIIYHTMFDNMQKAIDLNRPACQDTGEIMFFVKVGSRFPLLGELQSILKQAVEEATVKAPLRHNAVEIFDEVNTGKNTGSGVPWVTWDIIPDNDDAEIEVYMAGGGCTLPGRSKVLMPSEGYEGVVKFVFENISTLAVNACPPVLVGVGIATSVETAAVLSRKAILRPIGSRHPNPKAAELELRLEEGLNRLGIGPQGLTGNSSVMGVHIESAARHPSTIGVAVSTGCWAHRRGTLLVHADLTFENLSHTRSAL
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MMSESNKQQAVNKLTEIVANFTAMISTRMPDDVVDKLKQLKDAETSSMGKIIYHTMFDNMQKAIDLNRPACQDTGEIMFFVKVGSRFPLLGELQSILKQAVEEATVKAPLRHNAVEIFDEVNTGKNTGSGVPWVTWDIIPDNDDAEIEVYMAGGGCTLPGRSKVLMPSEGYEGVVKFVFENISTLAVNACPPVLVGVGIATSVETAAVLSRKAILRPIGSRHPNPKAAELELRLEEGLNRLGIGPQGLTGNSSVMGVHIESAARHPSTIGVAVSTGCWAHRRGTLLVHADLTFENLSHTRSAL
CCTTTTHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCTTTTTTEEEEEEEETTTTCCCHHHHHHHHHHHHHHHHCCCCTTTTEECCCTTTTTTTCCCCCCEEEEEEETTTTEEEEEEEECTTTTTTTHHHHCCTTTTTTHHHHHHHHHHHHHCTTTTTTTTTTEEEECCCHHHHHHHHHHHHHCCCCCCTTTTHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEETTTTTTTTEEEEEECTTTTCEEEEEETTTTEEEEECCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300

Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position

Predicted Solvent Accessibility

>0-buried to 9-exposed
MMSESNKQQAVNKLTEIVANFTAMISTRMPDDVVDKLKQLKDAETSSMGKIIYHTMFDNMQKAIDLNRPACQDTGEIMFFVKVGSRFPLLGELQSILKQAVEEATVKAPLRHNAVEIFDEVNTGKNTGSGVPWVTWDIIPDNDDAEIEVYMAGGGCTLPGRSKVLMPSEGYEGVVKFVFENISTLAVNACPPVLVGVGIATSVETAAVLSRKAILRPIGSRHPNPKAAELELRLEEGLNRLGIGPQGLTGNSSVMGVHIESAARHPSTIGVAVSTGCWAHRRGTLLVHADLTFENLSHTRSAL
542323332103200200030011001301320031033034222121011002100200210232221003110000000100240202230120022001201222202310011023212232112201000000013422010000012210211010210222311300020002102202130011000000021102000100120002212232222301211120120014010002002120000001010012111000000000000111010102431101112324334
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300

Download Predicted Solvent Accessibility

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.407 to 2r2vA SCOP code=h.1.3.1	TM-score=0.398 to 1kgtA SCOP code=b.81.1.2	TM-score=0.399 to 1of9A SCOP code=a.64.1.4	TM-score=0.391 to 2r2vA SCOP code=h.1.3.1	TM-score=0.422 to 2r2vA SCOP code=h.1.3.1

Estimated TM-score of Model 1: 0.3347 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.3718 ±0.0778