QUARK Ab Initio Results for SFSA_ECOLI

Submitted Primary Sequence

>Length 234
MEFSPPLQRATLIQRYKRFLADVITPDGRELTLHCPNTGAMTGCATPGDTVWYSTSDNTKRKYPHTWELTQSQSGAFICVNTLWANRLTKEAILNESISELSGYSSLKSEVKYGAERSRIDFMLQADSRPDCYIEVKSVTLAENEQGYFPDAVTERGQKHLRELMSVAAEGQRAVIFFAVLHSAITRFSPARHIDEKYAQLLSEAQQRGVEILAYKAEISAEGMALKKSLPVTL
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MEFSPPLQRATLIQRYKRFLADVITPDGRELTLHCPNTGAMTGCATPGDTVWYSTSDNTKRKYPHTWELTQSQSGAFICVNTLWANRLTKEAILNESISELSGYSSLKSEVKYGAERSRIDFMLQADSRPDCYIEVKSVTLAENEQGYFPDAVTERGQKHLRELMSVAAEGQRAVIFFAVLHSAITRFSPARHIDEKYAQLLSEAQQRGVEILAYKAEISAEGMALKKSLPVTL
CCTTTTCEEEEEEETTTTEEEEEETTTTTEEEEETTTTTCTTTTTTTTTEEEEETTTTTTTCCCEEEEEEETTTTTEETTTTCHHHHHHHHHHTTTTCTTTTTTCEEEEEEEETTTTCEEEEEEETTTTTTTTETTTTTETTTTCEEETTTTCCHHHHHHHHHHHHHHHCCCCEEEEEEEETTTTCEEECCCCCCHHHHHHHHHHHHCCCEEEEEEEEETTTTEETTTTTEEEC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230

Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position
Download Distance Profile from Fragments

Predicted Solvent Accessibility

>0-buried to 9-exposed
MEFSPPLQRATLIQRYKRFLADVITPDGRELTLHCPNTGAMTGCATPGDTVWYSTSDNTKRKYPHTWELTQSQSGAFICVNTLWANRLTKEAILNESISELSGYSSLKSEVKYGAERSRIDFMLQADSRPDCYIEVKSVTLAENEQGYFPDAVTERGQKHLRELMSVAAEGQRAVIFFAVLHSAITRFSPARHIDEKYAQLLSEAQQRGVEILAYKAEISAEGMALKKSLPVTL
552333112010021231000101023132000001121102100131020000223334341201010011222100000011012002200333202303202101101211344010000021333230001011010232210102301133013002200200441210000000013102100003301330020012025320100002010143102023202123
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230

Download Predicted Solvent Accessibility

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.375 to 1qjsA SCOP code=b.66.1.1	TM-score=0.379 to 2p12A SCOP code=b.175.1.1	TM-score=0.402 to 1u1wB SCOP code=d.21.1.2	TM-score=0.410 to 1kitA SCOP code=b.29.1.8	TM-score=0.391 to 2ff4A SCOP code=a.4.6.1

Estimated TM-score of Model 1: 0.3158 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.3516 ±0.0778