QUARK Ab Initio Results for SECM_ECOLI

Submitted Primary Sequence

>Length 170
MSGILTRWRQFGKRYFWPHLLLGMVAASLGLPALSNAAEPNAPAKATTRNHEPSAKVNFGQLALLEANTRRPNSNYSVDYWHQHAIRTVIRHLSFAMAPQTLPVAEESLPLQAQHLALLDTLSALLTQEGTPSEKGYRIDYAHFTPQAKFSTPVWISQAQGIRAGPQRLT
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MSGILTRWRQFGKRYFWPHLLLGMVAASLGLPALSNAAEPNAPAKATTRNHEPSAKVNFGQLALLEANTRRPNSNYSVDYWHQHAIRTVIRHLSFAMAPQTLPVAEESLPLQAQHLALLDTLSALLTQEGTPSEKGYRIDYAHFTPQAKFSTPVWISQAQGIRAGPQRLT
TTTTHHHHHHHCHHHHHHHHHHHHHHHHCCCCCTTTTCTTTTCCCCCHHHHHHHHHHHHHHHHHHHHTTTTTTTTTTCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCTTTTTCCECTTTTTTHHHHHHHHCCCCCTTTTCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170

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Download Distance Profile from Fragments

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSGILTRWRQFGKRYFWPHLLLGMVAASLGLPALSNAAEPNAPAKATTRNHEPSAKVNFGQLALLEANTRRPNSNYSVDYWHQHAIRTVIRHLSFAMAPQTLPVAEESLPLQAQHLALLDTLSALLTQEGTPSEKGYRIDYAHFTPQAKFSTPVWISQAQGIRAGPQRLT
52001110120022000000000000010101002222222122422231112101100010010223222221212011001000110021011010231131133212121210000100000022212223312313111001213011100001011031123424
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170

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Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.476 to 2c1yA SCOP code=a.71.1.1	TM-score=0.404 to 1ny9A SCOP code=a.181.1.1	TM-score=0.460 to 2izyE SCOP code=a.31.1.1	TM-score=0.421 to 1qgjA SCOP code=a.93.1.1	TM-score=0.442 to 1n5uA SCOP code=a.126.1.1

Estimated TM-score of Model 1: 0.2939 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.3281 ±0.0778