QUARK Ab Initio Results for PHNJ_ECOLI

Submitted Primary Sequence

>Length 281
MANLSGYNFAYLDEQTKRMIRRAILKAVAIPGYQVPFGGREMPMPYGWGTGGIQLTASVIGESDVLKVIDQGADDTTNAVSIRNFFKRVTGVNTTERTDDATVIQTRHRIPETPLTEDQIIIFQVPIPEPLRFIEPRETETRTMHALEEYGVMQVKLYEDIARFGHIATTYAYPVKVNGRYVMDPSPIPKFDNPKMDMMPALQLFGAGREKRIYAVPPFTRVESLDFDDHPFTVQQWDEPCAICGSTHSYLDEVVLDDAGNRMFVCSDTDYCRQQSEAKNQ
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MANLSGYNFAYLDEQTKRMIRRAILKAVAIPGYQVPFGGREMPMPYGWGTGGIQLTASVIGESDVLKVIDQGADDTTNAVSIRNFFKRVTGVNTTERTDDATVIQTRHRIPETPLTEDQIIIFQVPIPEPLRFIEPRETETRTMHALEEYGVMQVKLYEDIARFGHIATTYAYPVKVNGRYVMDPSPIPKFDNPKMDMMPALQLFGAGREKRIYAVPPFTRVESLDFDDHPFTVQQWDEPCAICGSTHSYLDEVVLDDAGNRMFVCSDTDYCRQQSEAKNQ
CTTTTTTTHHHHCHHHHHHHHHHHHHHHTTTTTCCTTTTTTTCCTTTTTTCCEEEEEEEETTTTEEEEETTTTTTTTHHHHHHHHHHHTTTTCTTTTTTTTEEEEECCCCTTTTCTTTTEEEEETTTTTTTEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEETTTTCETTTTTEEECCCCCCCTTTTTTTTTHHHHHHCCCCCEEEEECTTTTCCCCCTTTTCCCCTTTTTTCHHHHCTTTTEEEEEETTTTTCEEEEECCHHHHHHHHHHCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280

Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position
Download Distance Profile from Fragments

Predicted Solvent Accessibility

>0-buried to 9-exposed
MANLSGYNFAYLDEQTKRMIRRAILKAVAIPGYQVPFGGREMPMPYGWGTGGIQLTASVIGESDVLKVIDQGADDTTNAVSIRNFFKRVTGVNTTERTDDATVIQTRHRIPETPLTEDQIIIFQVPIPEPLRFIEPRETETRTMHALEEYGVMQVKLYEDIARFGHIATTYAYPVKVNGRYVMDPSPIPKFDNPKMDMMPALQLFGAGREKRIYAVPPFTRVESLDFDDHPFTVQQWDEPCAICGSTHSYLDEVVLDDAGNRMFVCSDTDYCRQQSEAKNQ
55422211111013301310130003101021120111132010120111100100000014310010022123311100001200330111322342330200111220232313331000010212210210112221121010032001000200100041120000120001021000001120131211301201001000012222010012114121021221202133132101001122110110012221220000001200331234355
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280

Download Predicted Solvent Accessibility

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.417 to 2r2vA SCOP code=h.1.3.1	TM-score=0.398 to 1r48A SCOP code=h.4.15.1	TM-score=0.390 to 1kd9A SCOP code=h.1.3.1	TM-score=0.433 to 2r2vA SCOP code=h.1.3.1	TM-score=0.430 to 1ov9B SCOP code=a.155.1.1

Estimated TM-score of Model 1: 0.2550 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.2865 ±0.0778