QUARK Ab Initio Results for MALM_ECOLI

Submitted Primary Sequence

>Length 306
MKMNKSLIVLCLSAGLLASAPGISLADVNYVPQNTSDAPAIPSAALQQLTWTPVDQSKTQTTQLATGGQQLNVPGISGPVAAYSVPANIGELTLTLTSEVNKQTSVFAPNVLILDQNMTPSAFFPSSYFTYQEPGVMSADRLEGVMRLTPALGQQKLYVLVFTTEKDLQQTTQLLDPAKAYAKGVGNSIPDIPDPVARHTTDGLLKLKVKTNSSSSVLVGPLFGSSAPAPVTVGNTAAPAVAAPAPAPVKKSEPMLNDTESYFNTAIKNAVAKGDVDKALKLLDEAERLGSTSARSTFISSVKGKG
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MKMNKSLIVLCLSAGLLASAPGISLADVNYVPQNTSDAPAIPSAALQQLTWTPVDQSKTQTTQLATGGQQLNVPGISGPVAAYSVPANIGELTLTLTSEVNKQTSVFAPNVLILDQNMTPSAFFPSSYFTYQEPGVMSADRLEGVMRLTPALGQQKLYVLVFTTEKDLQQTTQLLDPAKAYAKGVGNSIPDIPDPVARHTTDGLLKLKVKTNSSSSVLVGPLFGSSAPAPVTVGNTAAPAVAAPAPAPVKKSEPMLNDTESYFNTAIKNAVAKGDVDKALKLLDEAERLGSTSARSTFISSVKGKG
CCCHHHHHHHHHHHHHHHCTTTTHCCTTTTCTTTTTTTTTTCHHHHHHTTTTECTTTTCEEEEETTTTTEEETTTTTTTTTEEEETTTTTTTEEEEEEEETTTTTEEEEEEEEETTTTCEEEETTTTTEEEETTTTCCTTTTEEEEEECTTTTTTTEEEEEECCHHHTTTTEETTTTHHHHHHHCCCCCTTTTCTTTTCTTTTEEEEEEETTTTCCEEEECTTTTCCCCCCCCCTTTTCCCCCCCCCCCCCCTTTTCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCTTTTHHHHHHHTTTTC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300

Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKMNKSLIVLCLSAGLLASAPGISLADVNYVPQNTSDAPAIPSAALQQLTWTPVDQSKTQTTQLATGGQQLNVPGISGPVAAYSVPANIGELTLTLTSEVNKQTSVFAPNVLILDQNMTPSAFFPSSYFTYQEPGVMSADRLEGVMRLTPALGQQKLYVLVFTTEKDLQQTTQLLDPAKAYAKGVGNSIPDIPDPVARHTTDGLLKLKVKTNSSSSVLVGPLFGSSAPAPVTVGNTAAPAVAAPAPAPVKKSEPMLNDTESYFNTAIKNAVAKGDVDKALKLLDEAERLGSTSARSTFISSVKGKG
552121001100000001001022113232123322312200020043021120332421201013212201132220100001012421301020102024322000000000143121000023320102332112121010102012222432100000022322342021211120012311321130321203112301010202123222000021112223121221222131222312222342222133012101200220034230320030021025132320221012213344
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300

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Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.390 to 1oyzA SCOP code=a.118.1.16	TM-score=0.391 to 2ptfA SCOP code=b.45.1.4	TM-score=0.392 to 2gp8A SCOP code=j.58.1.1	TM-score=0.397 to 2cg2A SCOP code=d.106.1.3	TM-score=0.369 to 1yhtA SCOP code=c.1.8.6

Estimated TM-score of Model 1: 0.3267 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.3633 ±0.0778