QUARK Ab Initio Results for LSPA_ECOLI

Submitted Primary Sequence

>Length 164
MSQSICSTGLRWLWLVVVVLIIDLGSKYLILQNFALGDTVPLFPSLNLHYARNYGAAFSFLADSGGWQRWFFAGIAIGISVILAVMMYRSKATQKLNNIAYALIIGGALGNLFDRLWHGFVVDMIDFYVGDWHFATFNLADTAICVGAALIVLEGFLPSRAKKQ
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MSQSICSTGLRWLWLVVVVLIIDLGSKYLILQNFALGDTVPLFPSLNLHYARNYGAAFSFLADSGGWQRWFFAGIAIGISVILAVMMYRSKATQKLNNIAYALIIGGALGNLFDRLWHGFVVDMIDFYVGDWHFATFNLADTAICVGAALIVLEGFLPSRAKKQ
CCCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHCTTTTEEEETTTTEEEEEETTTTEEEETTTTCCHHHHHHHHHHHHHHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHCTTTTEEEEEECCTTTTTTEEHHHHHHHHHHHHHHHHHHHTTTTTTT
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160

Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position
Download Distance Profile from Fragments

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSQSICSTGLRWLWLVVVVLIIDLGSKYLILQNFALGDTVPLFPSLNLHYARNYGAAFSFLADSGGWQRWFFAGIAIGISVILAVMMYRSKATQKLNNIAYALIIGGALGNLFDRLWHGFVVDMIDFYVGDWHFATFNLADTAICVGAALIVLEGFLPSRAKKQ
55432222000000000000001100100012202212101002000000021210000001211110100000000000000000013142222100000000000000100010010000000000001010000000000000000000010012232444
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160

Download Predicted Solvent Accessibility

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.479 to 1j30A SCOP code=a.25.1.1	TM-score=0.476 to 2b3tB SCOP code=e.38.1.1	TM-score=0.493 to 1e84A SCOP code=a.24.3.2	TM-score=0.476 to 1cf7B SCOP code=a.4.5.17	TM-score=0.496 to 2d2sA SCOP code=a.118.17.2

Estimated TM-score of Model 1: 0.3524 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.3908 ±0.0778