QUARK Ab Initio Results for LGT_ECOLI

Submitted Primary Sequence

>Length 291
MTSSYLHFPEFDPVIFSIGPVALHWYGLMYLVGFIFAMWLATRRANRPGSGWTKNEVENLLYAGFLGVFLGGRIGYVLFYNFPQFMADPLYLFRVWDGGMSFHGGLIGVIVVMIIFARRTKRSFFQVSDFIAPLIPFGLGAGRLGNFINGELWGRVDPNFPFAMLFPGSRTEDILLLQTNPQWQSIFDTYGVLPRHPSQLYELLLEGVVLFIILNLYIRKPRPMGAVSGLFLIGYGAFRIIVEFFRQPDAQFTGAWVQYISMGQILSIPMIVAGVIMMVWAYRRSPQQHVS
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MTSSYLHFPEFDPVIFSIGPVALHWYGLMYLVGFIFAMWLATRRANRPGSGWTKNEVENLLYAGFLGVFLGGRIGYVLFYNFPQFMADPLYLFRVWDGGMSFHGGLIGVIVVMIIFARRTKRSFFQVSDFIAPLIPFGLGAGRLGNFINGELWGRVDPNFPFAMLFPGSRTEDILLLQTNPQWQSIFDTYGVLPRHPSQLYELLLEGVVLFIILNLYIRKPRPMGAVSGLFLIGYGAFRIIVEFFRQPDAQFTGAWVQYISMGQILSIPMIVAGVIMMVWAYRRSPQQHVS
CCHHHCTTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCTTTTCHHHHHHHHHHHHHHHHHHHHHHHEEEECHHHHHHCHHHHHHHTTTTTCHHHHHHHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHHHHHHHHHHHTTTTTTTTCCCCCCEEEETTTTTTTHHHHCCCCCHHCTTTTTTTTEECCCCHHHHHHHHHHHHHHHHHHHHHCCCTTTTHHHHHHHHHHHHHHHHHHHCTTTTHHHHHHTTTTCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290

Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position

Predicted Solvent Accessibility

>0-buried to 9-exposed
MTSSYLHFPEFDPVIFSIGPVALHWYGLMYLVGFIFAMWLATRRANRPGSGWTKNEVENLLYAGFLGVFLGGRIGYVLFYNFPQFMADPLYLFRVWDGGMSFHGGLIGVIVVMIIFARRTKRSFFQVSDFIAPLIPFGLGAGRLGNFINGELWGRVDPNFPFAMLFPGSRTEDILLLQTNPQWQSIFDTYGVLPRHPSQLYELLLEGVVLFIILNLYIRKPRPMGAVSGLFLIGYGAFRIIVEFFRQPDAQFTGAWVQYISMGQILSIPMIVAGVIMMVWAYRRSPQQHVS
422110111300000000010101000000000000000000110233222123310110000000000000000000011021002000100211110100000000000000000231322002000000000000000000000000101121222010000011221311111221131111122121001120200100010000000000113223320100000000000010002002212120001102201001000000000000000102332344334
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290

Download Predicted Solvent Accessibility

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.433 to 2r2vA SCOP code=h.1.3.1	TM-score=0.428 to 1g3nC SCOP code=a.74.1.1	TM-score=0.499 to 1n4mA SCOP code=a.74.1.3	TM-score=0.507 to 1ad6A SCOP code=a.74.1.3	TM-score=0.444 to 2axtZ SCOP code=f.17.5.1

Estimated TM-score of Model 1: 0.4178 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.4607 ±0.0778