QUARK Ab Initio Results for YRHA_ECOLI

Submitted Primary Sequence

>Length 138
MMTKTQINKLIKMMNDLDYPFEAPLKESFIESIIQIEFNSNSTNCLEKLCNEVSILFKNQPDYLTFLRAMDGFEVNGLRLFSLSIPEPSVKNLFAVNEFYRNNDDFINPDLQERLVIGDYSISIFTYDIKGDAANLLI
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MMTKTQINKLIKMMNDLDYPFEAPLKESFIESIIQIEFNSNSTNCLEKLCNEVSILFKNQPDYLTFLRAMDGFEVNGLRLFSLSIPEPSVKNLFAVNEFYRNNDDFINPDLQERLVIGDYSISIFTYDIKGDAANLLI
CCCHHHHHHHHHHHTTTTTTTTTCCCHHHHHHHHCCCTTTTHHHHHHHHHHHHHHHHHCTTTTHHHHHHHTTTTECCEEEEETTTTTTHHHHHEETTTTETTTTCCCTTTTTTTEEETTTTEEEEEEECCCCHHHHHC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130

Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position
Download Distance Profile from Fragments

Predicted Solvent Accessibility

>0-buried to 9-exposed
MMTKTQINKLIKMMNDLDYPFEAPLKESFIESIIQIEFNSNSTNCLEKLCNEVSILFKNQPDYLTFLRAMDGFEVNGLRLFSLSIPEPSVKNLFAVNEFYRNNDDFINPDLQERLVIGDYSISIFTYDIKGDAANLLI
543331133003001213110312123200210122323230230033002100100322120010020011020100100002121210310000111012122101130322000022000000010322112114
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130

Download Predicted Solvent Accessibility

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.447 to 1u6gC SCOP code=a.118.1.2	TM-score=0.493 to 1fcfA SCOP code=b.36.1.3	TM-score=0.465 to 2i5uA SCOP code=a.275.1.1	TM-score=0.416 to 1k62B SCOP code=a.127.1.1	TM-score=0.466 to 2i5uA SCOP code=a.275.1.1

Estimated TM-score of Model 1: 0.3001 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.3348 ±0.0778