QUARK Ab Initio Results for YPDI_ECOLI

Submitted Primary Sequence

>Length 91
MKVNLILFSLFLLVSIMACNVFAFSISGGGSERSYKETEKTSAMTTTHSTKLQPSQAILFKMREDAPPLNLTEEMPPPFPTKANYLIHPVR
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--------10--------20--------30--------40--------50--------60--------70--------80--------90

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MKVNLILFSLFLLVSIMACNVFAFSISGGGSERSYKETEKTSAMTTTHSTKLQPSQAILFKMREDAPPLNLTEEMPPPFPTKANYLIHPVR
CCHHHHHHHHHHHHHHHHHCEEEEEECCTTTTTTTTTTCCCCEEEECTTTTCCHHHHHHHHHTTTTTTCCCTTTTTTTCCTTTTTTTTTTC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90

Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position
Download Distance Profile from Fragments

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKVNLILFSLFLLVSIMACNVFAFSISGGGSERSYKETEKTSAMTTTHSTKLQPSQAILFKMREDAPPLNLTEEMPPPFPTKANYLIHPVR
5411011111000000000000000012222332243233221011222232222210001133311203123311131223120001224
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--------10--------20--------30--------40--------50--------60--------70--------80--------90

Download Predicted Solvent Accessibility

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.444 to 1zaoA SCOP code=a.4.5.56	TM-score=0.494 to 1iugA SCOP code=c.67.1.3	TM-score=0.434 to 3bzkA SCOP code=a.60.2.6	TM-score=0.467 to 1r6tA SCOP code=a.16.1.3	TM-score=0.460 to 1gntA SCOP code=e.26.1.1

Estimated TM-score of Model 1: 0.2859 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.3196 ±0.0778